Experiment: MoLS4 with Spermidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0279 and wbaZ-2 are separated by 312 nucleotides wbaZ-2 and DVU0281 are separated by 104 nucleotides
DVU0279: DVU0279 - sulfate permease family protein (TIGR), at 322,378 to 324,084
DVU0279
DVU0280: wbaZ-2 - glycosyl transferase, group 1 family protein (TIGR), at 324,397 to 325,536
wbaZ-2
DVU0281: DVU0281 - exopolysaccharide biosynthesis protein, putative (TIGR), at 325,641 to 327,074
DVU0281
Position (kb) 324
325
326 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 323.469 kb on - strand, within DVU0279 at 323.485 kb on - strand, within DVU0279 at 323.544 kb on - strand, within DVU0279 at 323.623 kb on - strand, within DVU0279 at 323.655 kb on + strand, within DVU0279 at 323.663 kb on - strand, within DVU0279 at 323.663 kb on - strand, within DVU0279 at 323.705 kb on - strand, within DVU0279 at 323.710 kb on + strand, within DVU0279 at 323.721 kb on + strand, within DVU0279 at 323.736 kb on + strand, within DVU0279 at 323.736 kb on - strand, within DVU0279 at 323.852 kb on - strand, within DVU0279 at 323.852 kb on - strand, within DVU0279 at 323.884 kb on - strand, within DVU0279 at 323.884 kb on - strand, within DVU0279 at 323.906 kb on - strand, within DVU0279 at 323.925 kb on + strand at 323.945 kb on - strand at 324.032 kb on + strand at 324.057 kb on + strand at 324.065 kb on - strand at 324.074 kb on + strand at 324.077 kb on - strand at 324.079 kb on + strand at 324.082 kb on - strand at 324.169 kb on - strand at 324.183 kb on + strand at 324.183 kb on + strand at 324.183 kb on + strand at 324.191 kb on - strand at 324.191 kb on - strand at 324.325 kb on - strand at 324.561 kb on + strand, within wbaZ-2 at 324.640 kb on + strand, within wbaZ-2 at 324.712 kb on + strand, within wbaZ-2 at 324.712 kb on + strand, within wbaZ-2 at 324.824 kb on - strand, within wbaZ-2 at 324.868 kb on + strand, within wbaZ-2 at 324.982 kb on + strand, within wbaZ-2 at 325.131 kb on - strand, within wbaZ-2 at 325.189 kb on + strand, within wbaZ-2 at 325.196 kb on + strand, within wbaZ-2 at 325.221 kb on - strand, within wbaZ-2 at 325.221 kb on - strand, within wbaZ-2 at 325.223 kb on + strand, within wbaZ-2 at 325.235 kb on + strand, within wbaZ-2 at 325.310 kb on - strand, within wbaZ-2 at 325.310 kb on - strand, within wbaZ-2 at 325.567 kb on + strand at 325.896 kb on + strand, within DVU0281 at 326.087 kb on + strand, within DVU0281 at 326.104 kb on - strand, within DVU0281 at 326.242 kb on - strand, within DVU0281 at 326.284 kb on - strand, within DVU0281
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Spermidine (N) remove 323,469 - DVU0279 0.64 +0.1 323,485 - DVU0279 0.65 -1.2 323,544 - DVU0279 0.68 +1.3 323,623 - DVU0279 0.73 -0.4 323,655 + DVU0279 0.75 -1.5 323,663 - DVU0279 0.75 +1.2 323,663 - DVU0279 0.75 -2.1 323,705 - DVU0279 0.78 +0.3 323,710 + DVU0279 0.78 -0.1 323,721 + DVU0279 0.79 -0.3 323,736 + DVU0279 0.80 -0.2 323,736 - DVU0279 0.80 +0.1 323,852 - DVU0279 0.86 -0.4 323,852 - DVU0279 0.86 -0.5 323,884 - DVU0279 0.88 -2.3 323,884 - DVU0279 0.88 -1.3 323,906 - DVU0279 0.90 -0.4 323,925 + -0.2 323,945 - +0.5 324,032 + -1.6 324,057 + +0.1 324,065 - +0.5 324,074 + -0.8 324,077 - +1.4 324,079 + +0.9 324,082 - +0.8 324,169 - +0.8 324,183 + +0.2 324,183 + -0.3 324,183 + -0.4 324,191 - -1.3 324,191 - +0.3 324,325 - +0.1 324,561 + wbaZ-2 DVU0280 0.14 -2.4 324,640 + wbaZ-2 DVU0280 0.21 -0.3 324,712 + wbaZ-2 DVU0280 0.28 -2.8 324,712 + wbaZ-2 DVU0280 0.28 -2.6 324,824 - wbaZ-2 DVU0280 0.37 -3.1 324,868 + wbaZ-2 DVU0280 0.41 -1.2 324,982 + wbaZ-2 DVU0280 0.51 -0.6 325,131 - wbaZ-2 DVU0280 0.64 -3.4 325,189 + wbaZ-2 DVU0280 0.69 -1.4 325,196 + wbaZ-2 DVU0280 0.70 +0.0 325,221 - wbaZ-2 DVU0280 0.72 -2.7 325,221 - wbaZ-2 DVU0280 0.72 -1.8 325,223 + wbaZ-2 DVU0280 0.72 -2.0 325,235 + wbaZ-2 DVU0280 0.74 -2.0 325,310 - wbaZ-2 DVU0280 0.80 -0.4 325,310 - wbaZ-2 DVU0280 0.80 -1.9 325,567 + +0.7 325,896 + DVU0281 0.18 -2.5 326,087 + DVU0281 0.31 -3.5 326,104 - DVU0281 0.32 -2.2 326,242 - DVU0281 0.42 -1.1 326,284 - DVU0281 0.45 -2.6
Or see this region's nucleotide sequence