Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0856

Experiment: MoLS4 with Spermidine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntDVU0855 and hemB overlap by 1 nucleotideshemB and nirJ-1 are separated by 9 nucleotides DVU0855: DVU0855 - radical SAM domain protein (TIGR), at 944,578 to 945,759 DVU0855 DVU0856: hemB - porphobilinogen synthase (TIGR), at 945,759 to 946,751 hemB DVU0857: nirJ-1 - radical SAM domain protein (TIGR), at 946,761 to 947,942 nirJ-1 Position (kb) 945 946 947Strain fitness (log2 ratio) -1 0 1at 945.778 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with Spermidine (N)
remove
945,778 - +0.1

Or see this region's nucleotide sequence