Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2486

Experiment: BG11 with Chloride 250 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Chloride 250 mM
2,565,733	+		Synpcc7942_2484	0.63	+6.2
2,565,733	-		Synpcc7942_2484	0.63	+4.6
2,565,735	+		Synpcc7942_2484	0.63	+4.2
2,565,738	+		Synpcc7942_2484	0.64	+4.7
2,565,743	-		Synpcc7942_2484	0.64	+5.2
2,565,806	-		Synpcc7942_2484	0.73	+3.7
2,565,806	-		Synpcc7942_2484	0.73	+3.9
2,565,810	+		Synpcc7942_2484	0.74	+4.5
2,565,831	-		Synpcc7942_2484	0.77	+3.3
2,565,844	+		Synpcc7942_2484	0.79	+2.9
2,565,852	-		Synpcc7942_2484	0.80	+5.7
2,565,865	+		Synpcc7942_2484	0.82	-2.0
2,565,901	-		Synpcc7942_2484	0.87	+5.5
2,565,953	+				+4.2
2,565,961	-				+4.1
2,565,995	-				+1.3
2,566,223	-		Synpcc7942_2485	0.15	+6.4
2,566,236	-		Synpcc7942_2485	0.17	+5.7
2,566,258	+		Synpcc7942_2485	0.21	+6.1
2,566,266	+		Synpcc7942_2485	0.22	+3.9
2,566,274	-		Synpcc7942_2485	0.23	+5.1
2,566,313	+		Synpcc7942_2485	0.30	+2.9
2,566,313	+		Synpcc7942_2485	0.30	+4.0
2,566,368	-		Synpcc7942_2485	0.39	+4.4
2,566,394	+		Synpcc7942_2485	0.44	+5.0
2,566,430	+		Synpcc7942_2485	0.50	+4.4
2,566,431	+		Synpcc7942_2485	0.50	+5.3
2,566,445	+		Synpcc7942_2485	0.52	+4.6
2,566,454	+		Synpcc7942_2485	0.54	+5.8
2,566,477	+		Synpcc7942_2485	0.58	+5.4
2,566,537	-		Synpcc7942_2485	0.68	+5.3
2,566,575	+		Synpcc7942_2485	0.74	+5.5
2,566,637	+		Synpcc7942_2485	0.85	+5.9
2,566,661	-		Synpcc7942_2485	0.89	+7.0
2,566,664	+		Synpcc7942_2485	0.89	+5.9
2,566,687	+				+3.8
2,566,687	+				+5.3
2,566,695	-				+4.5
2,566,781	+				+5.5
2,566,886	+		Synpcc7942_2486	0.10	+5.6
2,566,892	-		Synpcc7942_2486	0.11	+5.8
2,566,894	+		Synpcc7942_2486	0.11	+5.9
2,566,894	-		Synpcc7942_2486	0.11	+5.6
2,566,937	-		Synpcc7942_2486	0.13	+6.2
2,566,937	-		Synpcc7942_2486	0.13	+4.5
2,566,963	-		Synpcc7942_2486	0.15	+1.3
2,566,963	-		Synpcc7942_2486	0.15	+5.4
2,566,973	-		Synpcc7942_2486	0.16	+5.7
2,566,973	-		Synpcc7942_2486	0.16	+3.8
2,566,973	-		Synpcc7942_2486	0.16	+3.4
2,566,998	-		Synpcc7942_2486	0.17	+6.6
2,567,012	+		Synpcc7942_2486	0.18	+4.7
2,567,031	-		Synpcc7942_2486	0.19	+5.3
2,567,049	+		Synpcc7942_2486	0.20	+5.3
2,567,060	+		Synpcc7942_2486	0.21	+5.0
2,567,068	-		Synpcc7942_2486	0.22	+6.4
2,567,080	-		Synpcc7942_2486	0.22	+5.1
2,567,115	-		Synpcc7942_2486	0.25	+5.6
2,567,118	+		Synpcc7942_2486	0.25	+4.2
2,567,126	-		Synpcc7942_2486	0.25	+2.0
2,567,140	+		Synpcc7942_2486	0.26	+5.2
2,567,163	-		Synpcc7942_2486	0.28	+7.5
2,567,164	+		Synpcc7942_2486	0.28	+5.5
2,567,165	+		Synpcc7942_2486	0.28	+5.4
2,567,165	+		Synpcc7942_2486	0.28	+3.2
2,567,173	-		Synpcc7942_2486	0.28	+5.4
2,567,173	-		Synpcc7942_2486	0.28	+5.2
2,567,196	-		Synpcc7942_2486	0.30	+5.7
2,567,275	-		Synpcc7942_2486	0.35	+6.1
2,567,293	+		Synpcc7942_2486	0.36	+6.0
2,567,315	+		Synpcc7942_2486	0.37	+5.2
2,567,339	+		Synpcc7942_2486	0.39	+6.0
2,567,339	+		Synpcc7942_2486	0.39	+5.2
2,567,347	-		Synpcc7942_2486	0.39	+4.3
2,567,347	-		Synpcc7942_2486	0.39	+5.2
2,567,360	-		Synpcc7942_2486	0.40	+3.0
2,567,384	-		Synpcc7942_2486	0.42	+5.2
2,567,394	-		Synpcc7942_2486	0.42	+4.5
2,567,459	+		Synpcc7942_2486	0.46	+5.2
2,567,464	+		Synpcc7942_2486	0.47	+5.2
2,567,517	+		Synpcc7942_2486	0.50	+4.5
2,567,584	-		Synpcc7942_2486	0.54	+4.8
2,567,621	+		Synpcc7942_2486	0.57	+5.6
2,567,621	+		Synpcc7942_2486	0.57	+8.0
2,567,629	-		Synpcc7942_2486	0.57	+3.0
2,567,629	-		Synpcc7942_2486	0.57	+4.4
2,567,713	+		Synpcc7942_2486	0.62	+5.9
2,567,770	+		Synpcc7942_2486	0.66	+1.7
2,567,770	+		Synpcc7942_2486	0.66	+7.0
2,567,778	-		Synpcc7942_2486	0.67	+6.4
2,567,778	-		Synpcc7942_2486	0.67	+4.8
2,567,778	-		Synpcc7942_2486	0.67	+5.2
2,567,791	+		Synpcc7942_2486	0.67	+6.9
2,567,815	-		Synpcc7942_2486	0.69	+6.0
2,567,850	-		Synpcc7942_2486	0.71	+4.9
2,567,861	+		Synpcc7942_2486	0.72	+4.3
2,567,921	-		Synpcc7942_2486	0.76	+4.5
2,567,926	-		Synpcc7942_2486	0.76	+5.7
2,567,970	-		Synpcc7942_2486	0.79	+5.4
2,567,988	+		Synpcc7942_2486	0.80	+4.6
2,567,988	+		Synpcc7942_2486	0.80	+2.0
2,567,988	+		Synpcc7942_2486	0.80	+4.2
2,567,998	+		Synpcc7942_2486	0.81	+5.4
2,567,998	+		Synpcc7942_2486	0.81	+3.0
2,567,998	+		Synpcc7942_2486	0.81	+4.5
2,567,998	+		Synpcc7942_2486	0.81	+4.4
2,567,998	+		Synpcc7942_2486	0.81	+6.0
2,568,006	-		Synpcc7942_2486	0.81	+5.2
2,568,006	-		Synpcc7942_2486	0.81	+5.3
2,568,006	-		Synpcc7942_2486	0.81	+4.2
2,568,006	-		Synpcc7942_2486	0.81	+5.1
2,568,046	-		Synpcc7942_2486	0.84	+3.6
2,568,070	-		Synpcc7942_2486	0.85	+3.4
2,568,103	-		Synpcc7942_2486	0.87	+5.1
2,568,103	-		Synpcc7942_2486	0.87	+4.4
2,568,103	-		Synpcc7942_2486	0.87	+5.1
2,568,128	-		Synpcc7942_2486	0.89	+4.8
2,568,141	-		Synpcc7942_2486	0.90	+7.5
2,568,143	+		Synpcc7942_2486	0.90	+4.5
2,568,151	-				+6.8
2,568,169	-				+4.6
2,568,186	+				+5.3
2,568,208	+				+6.2
2,568,215	+				-1.2
2,568,216	+				+5.6
2,568,230	-				+5.3
2,568,246	+				+4.8
2,568,246	+				+5.1
2,568,246	+				+0.8
2,568,246	+				+4.9
2,568,251	+				+6.5
2,568,259	-				+5.4
2,568,301	+				+0.8
2,568,309	-				+2.4
2,568,309	-				-0.6
2,568,324	-				+2.1
2,568,564	-				+1.4
2,568,590	+				+2.3
2,568,602	+				-0.9
2,568,625	-				+1.8
2,568,637	+		Synpcc7942_2487	0.11	+0.8
2,568,663	+		Synpcc7942_2487	0.23	+3.4
2,568,664	+		Synpcc7942_2487	0.23	+0.9
2,568,672	-		Synpcc7942_2487	0.27	+0.5
2,568,672	-		Synpcc7942_2487	0.27	-0.4
2,568,672	-		Synpcc7942_2487	0.27	+1.7
2,568,682	-		Synpcc7942_2487	0.32	+4.0
2,568,785	+		Synpcc7942_2487	0.79	+1.8
2,568,809	+		Synpcc7942_2487	0.89	+1.3
2,568,831	+				+0.7
2,568,839	-				-0.2
2,568,868	+				-0.4
2,568,874	-				+0.4
2,568,874	-				+0.1
2,568,874	-				-0.0
2,568,874	-				+0.4
2,568,875	+				-0.2
2,568,876	+				-0.1
2,568,876	+				+0.5
2,568,876	+				+0.2
2,568,876	+				+1.5
2,568,876	+				+0.7
2,568,876	+				+0.3
2,568,884	-				-0.9
2,568,884	-				-0.6
2,568,884	-				+1.1
2,568,884	-				-1.3
2,568,884	-				-0.4
2,568,884	-				+0.9
2,568,884	-				+1.2
2,568,884	-				-0.8
2,568,961	+				+0.3
2,568,969	-		Synpcc7942_2488	0.11	-0.9
2,568,971	+		Synpcc7942_2488	0.11	-1.0
2,568,995	-		Synpcc7942_2488	0.15	-0.5
2,568,998	-		Synpcc7942_2488	0.16	+0.7
2,569,047	+		Synpcc7942_2488	0.24	-2.1
2,569,059	+		Synpcc7942_2488	0.26	+0.6
2,569,060	-		Synpcc7942_2488	0.26	-1.2
2,569,064	+		Synpcc7942_2488	0.26	-0.2
2,569,064	+		Synpcc7942_2488	0.26	-0.4
2,569,072	-		Synpcc7942_2488	0.28	+0.4
2,569,072	-				-0.2
2,569,072	-		Synpcc7942_2488	0.28	+0.3
2,569,072	-		Synpcc7942_2488	0.28	-0.1
2,569,074	+		Synpcc7942_2488	0.28	+0.0
2,569,107	+		Synpcc7942_2488	0.33	+0.2
2,569,113	+		Synpcc7942_2488	0.34	+0.1
2,569,121	-		Synpcc7942_2488	0.36	-1.3
2,569,152	+		Synpcc7942_2488	0.41	+1.1
2,569,261	-		Synpcc7942_2488	0.59	-0.4
2,569,268	-		Synpcc7942_2488	0.60	+0.4
2,569,272	+		Synpcc7942_2488	0.61	+2.0
2,569,274	+				+1.1
2,569,275	-		Synpcc7942_2488	0.61	-1.2
2,569,280	-		Synpcc7942_2488	0.62	+0.2
2,569,282	+		Synpcc7942_2488	0.62	+1.4
2,569,282	+		Synpcc7942_2488	0.62	-0.4
2,569,287	+		Synpcc7942_2488	0.63	+1.2