Experiment: BG11 with Chloride 250 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0759 and Synpcc7942_0760 are separated by 9 nucleotides Synpcc7942_0760 and Synpcc7942_0761 are separated by 225 nucleotides Synpcc7942_0761 and Synpcc7942_0762 are separated by 502 nucleotides
Synpcc7942_0759: Synpcc7942_0759 - hypothetical protein, at 752,574 to 753,953
_0759
Synpcc7942_0760: Synpcc7942_0760 - hypothetical protein, at 753,963 to 754,553
_0760
Synpcc7942_0761: Synpcc7942_0761 - hypothetical protein, at 754,779 to 755,507
_0761
Synpcc7942_0762: Synpcc7942_0762 - hypothetical protein, at 756,010 to 756,561
_0762
Position (kb) 754
755
756 Strain fitness (log2 ratio) -2
-1
0
1
2 at 753.993 kb on - strand at 754.011 kb on - strand at 754.076 kb on + strand, within Synpcc7942_0760 at 754.418 kb on - strand, within Synpcc7942_0760 at 754.768 kb on - strand at 754.831 kb on + strand at 754.831 kb on + strand at 754.831 kb on - strand at 754.839 kb on - strand at 754.869 kb on + strand, within Synpcc7942_0761 at 754.871 kb on + strand, within Synpcc7942_0761 at 754.894 kb on + strand, within Synpcc7942_0761 at 754.894 kb on + strand, within Synpcc7942_0761 at 755.332 kb on + strand, within Synpcc7942_0761 at 755.345 kb on + strand, within Synpcc7942_0761 at 755.380 kb on - strand, within Synpcc7942_0761 at 755.695 kb on - strand at 755.757 kb on + strand at 755.788 kb on - strand at 755.788 kb on - strand at 755.788 kb on - strand at 755.815 kb on + strand at 755.893 kb on + strand at 755.895 kb on + strand at 755.901 kb on - strand at 755.903 kb on + strand at 755.972 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction BG11 with Chloride 250 mM remove 753,993 - +1.5 754,011 - +0.5 754,076 + Synpcc7942_0760 0.19 -1.6 754,418 - Synpcc7942_0760 0.77 +1.8 754,768 - -0.9 754,831 + -1.5 754,831 + +0.7 754,831 - -0.6 754,839 - -0.8 754,869 + Synpcc7942_0761 0.12 -0.1 754,871 + Synpcc7942_0761 0.13 +2.5 754,894 + Synpcc7942_0761 0.16 -0.4 754,894 + Synpcc7942_0761 0.16 -0.4 755,332 + Synpcc7942_0761 0.76 +1.9 755,345 + Synpcc7942_0761 0.78 +0.3 755,380 - Synpcc7942_0761 0.82 +1.3 755,695 - +1.7 755,757 + -2.0 755,788 - -0.3 755,788 - -1.6 755,788 - -0.3 755,815 + -0.4 755,893 + -0.4 755,895 + +0.1 755,901 - -1.6 755,903 + +1.8 755,972 + +0.1
Or see this region's nucleotide sequence