Experiment: MoLS4 with Spermidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2612 and DVU2613 are separated by 46 nucleotides DVU2613 and DVU2614 are separated by 74 nucleotides DVU2614 and DVU2615 are separated by 602 nucleotides
DVU2612: DVU2612 - conserved hypothetical protein (TIGR), at 2,731,396 to 2,731,785
DVU2612
DVU2613: DVU2613 - hypothetical protein (TIGR), at 2,731,832 to 2,732,398
DVU2613
DVU2614: DVU2614 - hypothetical protein (TIGR), at 2,732,473 to 2,733,090
DVU2614
DVU2615: DVU2615 - bacterial extracellular solute-binding protein, family 3 (TIGR), at 2,733,693 to 2,734,541
DVU2615
Position (kb)
2732
2733
2734 Strain fitness (log2 ratio)
-2
-1
0
1 at 2731.519 kb on - strand, within DVU2612 at 2731.533 kb on + strand, within DVU2612 at 2731.710 kb on - strand, within DVU2612 at 2731.822 kb on - strand at 2732.463 kb on + strand at 2732.471 kb on - strand at 2732.506 kb on - strand at 2733.061 kb on + strand at 2733.085 kb on + strand at 2733.085 kb on + strand at 2733.085 kb on + strand at 2733.085 kb on + strand at 2733.085 kb on + strand at 2733.093 kb on - strand at 2733.093 kb on - strand at 2733.093 kb on - strand at 2733.098 kb on + strand at 2733.129 kb on + strand at 2733.147 kb on + strand at 2733.185 kb on + strand at 2733.207 kb on + strand at 2733.220 kb on + strand at 2733.260 kb on + strand at 2733.260 kb on + strand at 2733.260 kb on + strand at 2733.357 kb on + strand at 2733.408 kb on + strand at 2733.418 kb on + strand at 2733.555 kb on - strand at 2733.562 kb on + strand at 2733.580 kb on + strand at 2733.592 kb on + strand at 2733.666 kb on + strand at 2733.791 kb on + strand, within DVU2615 at 2733.844 kb on + strand, within DVU2615 at 2733.855 kb on + strand, within DVU2615 at 2733.855 kb on + strand, within DVU2615 at 2733.863 kb on - strand, within DVU2615 at 2733.957 kb on - strand, within DVU2615 at 2733.957 kb on - strand, within DVU2615 at 2734.008 kb on - strand, within DVU2615
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Spermidine (N) remove 2,731,519 - DVU2612 0.32 -2.2 2,731,533 + DVU2612 0.35 -1.4 2,731,710 - DVU2612 0.81 -0.7 2,731,822 - -0.5 2,732,463 + -0.1 2,732,471 - -0.2 2,732,506 - -1.0 2,733,061 + -1.0 2,733,085 + +0.0 2,733,085 + +0.0 2,733,085 + -0.3 2,733,085 + +0.2 2,733,085 + +0.0 2,733,093 - -0.7 2,733,093 - -0.3 2,733,093 - +0.2 2,733,098 + +0.1 2,733,129 + -0.2 2,733,147 + -0.0 2,733,185 + -1.0 2,733,207 + -0.1 2,733,220 + -0.1 2,733,260 + -0.4 2,733,260 + -0.3 2,733,260 + +0.1 2,733,357 + -0.5 2,733,408 + -0.0 2,733,418 + -1.2 2,733,555 - -0.3 2,733,562 + -0.6 2,733,580 + -0.6 2,733,592 + -0.1 2,733,666 + -1.6 2,733,791 + DVU2615 0.12 -0.1 2,733,844 + DVU2615 0.18 -0.4 2,733,855 + DVU2615 0.19 -0.2 2,733,855 + DVU2615 0.19 +0.3 2,733,863 - DVU2615 0.20 -0.9 2,733,957 - DVU2615 0.31 +0.4 2,733,957 - DVU2615 0.31 -0.1 2,734,008 - DVU2615 0.37 -1.2
Or see this region's nucleotide sequence