Experiment: MoLS4 with Spermidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1244 and DVU1245 are separated by 108 nucleotides DVU1245 and DVU1246 are separated by 11 nucleotides DVU1246 and DVU1247 are separated by 31 nucleotides DVU1247 and argS are separated by 20 nucleotides
DVU1244: DVU1244 - conserved hypothetical protein (TIGR), at 1,330,922 to 1,331,368
DVU1244
DVU1245: DVU1245 - ABC transporter, ATP-binding protein (TIGR), at 1,331,477 to 1,332,301
DVU1245
DVU1246: DVU1246 - membrane protein, putative (TIGR), at 1,332,313 to 1,333,116
DVU1246
DVU1247: DVU1247 - hypothetical protein (TIGR), at 1,333,148 to 1,333,969
DVU1247
DVU1248: argS - arginyl-tRNA synthetase (TIGR), at 1,333,990 to 1,335,645
argS
Position (kb)
1332
1333
1334 Strain fitness (log2 ratio)
-2
-1
0
1 at 1331.320 kb on - strand, within DVU1244 at 1331.380 kb on + strand at 1331.464 kb on - strand at 1331.609 kb on + strand, within DVU1245 at 1331.676 kb on - strand, within DVU1245 at 1331.776 kb on + strand, within DVU1245 at 1331.908 kb on + strand, within DVU1245 at 1331.916 kb on - strand, within DVU1245 at 1331.916 kb on - strand, within DVU1245 at 1332.151 kb on - strand, within DVU1245 at 1332.278 kb on - strand at 1332.401 kb on + strand, within DVU1246 at 1332.432 kb on + strand, within DVU1246 at 1332.578 kb on + strand, within DVU1246 at 1332.586 kb on + strand, within DVU1246 at 1332.694 kb on + strand, within DVU1246 at 1332.760 kb on - strand, within DVU1246 at 1332.849 kb on + strand, within DVU1246 at 1333.080 kb on - strand at 1333.177 kb on - strand at 1333.184 kb on - strand at 1333.184 kb on - strand at 1333.241 kb on + strand, within DVU1247 at 1333.243 kb on + strand, within DVU1247 at 1333.282 kb on + strand, within DVU1247 at 1333.476 kb on + strand, within DVU1247 at 1333.494 kb on + strand, within DVU1247 at 1333.781 kb on - strand, within DVU1247 at 1333.803 kb on + strand, within DVU1247 at 1333.859 kb on - strand, within DVU1247 at 1333.924 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Spermidine (N) remove 1,331,320 - DVU1244 0.89 -0.3 1,331,380 + -0.0 1,331,464 - +0.1 1,331,609 + DVU1245 0.16 -1.5 1,331,676 - DVU1245 0.24 -1.2 1,331,776 + DVU1245 0.36 -0.9 1,331,908 + DVU1245 0.52 +0.2 1,331,916 - DVU1245 0.53 -1.4 1,331,916 - DVU1245 0.53 -1.6 1,332,151 - DVU1245 0.82 -0.3 1,332,278 - -0.6 1,332,401 + DVU1246 0.11 -0.5 1,332,432 + DVU1246 0.15 -1.6 1,332,578 + DVU1246 0.33 +0.8 1,332,586 + DVU1246 0.34 -1.1 1,332,694 + DVU1246 0.47 -0.9 1,332,760 - DVU1246 0.56 -1.9 1,332,849 + DVU1246 0.67 +0.2 1,333,080 - -0.3 1,333,177 - -0.5 1,333,184 - -0.5 1,333,184 - +0.2 1,333,241 + DVU1247 0.11 -1.1 1,333,243 + DVU1247 0.12 -1.3 1,333,282 + DVU1247 0.16 -2.0 1,333,476 + DVU1247 0.40 +0.2 1,333,494 + DVU1247 0.42 -0.2 1,333,781 - DVU1247 0.77 -0.3 1,333,803 + DVU1247 0.80 -0.3 1,333,859 - DVU1247 0.86 -1.4 1,333,924 - -0.5
Or see this region's nucleotide sequence