Experiment: MoLS4 with Spermidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0908 and DVU0909 are separated by 165 nucleotides DVU0909 and fliM are separated by 135 nucleotides
DVU0908: DVU0908 - ATP-dependent reduction of co(II)balamin (from data) , at 1,001,899 to 1,003,530
DVU0908
DVU0909: DVU0909 - hypothetical protein (TIGR), at 1,003,696 to 1,004,091
DVU0909
DVU0910: fliM - flagellar motor switch protein FliM (TIGR), at 1,004,227 to 1,005,207
fliM
Position (kb)
1003
1004
1005 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1002.701 kb on + strand, within DVU0908 at 1002.709 kb on - strand, within DVU0908 at 1002.709 kb on - strand, within DVU0908 at 1002.720 kb on + strand, within DVU0908 at 1002.762 kb on - strand, within DVU0908 at 1002.807 kb on - strand, within DVU0908 at 1002.955 kb on - strand, within DVU0908 at 1003.129 kb on + strand, within DVU0908 at 1003.152 kb on + strand, within DVU0908 at 1003.190 kb on - strand, within DVU0908 at 1003.258 kb on + strand, within DVU0908 at 1003.324 kb on + strand, within DVU0908 at 1003.350 kb on + strand, within DVU0908 at 1003.350 kb on + strand, within DVU0908 at 1003.429 kb on + strand at 1003.552 kb on + strand at 1003.640 kb on - strand at 1003.786 kb on + strand, within DVU0909 at 1003.786 kb on + strand, within DVU0909 at 1003.791 kb on + strand, within DVU0909 at 1003.794 kb on - strand, within DVU0909 at 1003.940 kb on - strand, within DVU0909 at 1004.050 kb on - strand, within DVU0909 at 1004.109 kb on + strand at 1004.117 kb on + strand at 1004.177 kb on - strand at 1004.335 kb on + strand, within fliM at 1004.452 kb on + strand, within fliM at 1004.645 kb on - strand, within fliM at 1004.679 kb on - strand, within fliM at 1004.679 kb on - strand, within fliM at 1004.688 kb on - strand, within fliM at 1004.690 kb on + strand, within fliM at 1004.768 kb on - strand, within fliM at 1004.903 kb on + strand, within fliM at 1004.945 kb on - strand, within fliM at 1004.979 kb on + strand, within fliM at 1005.058 kb on - strand, within fliM at 1005.065 kb on - strand, within fliM at 1005.083 kb on - strand, within fliM
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Spermidine (N) remove 1,002,701 + DVU0908 0.49 -3.3 1,002,709 - DVU0908 0.50 -3.0 1,002,709 - DVU0908 0.50 -3.2 1,002,720 + DVU0908 0.50 -3.6 1,002,762 - DVU0908 0.53 -3.5 1,002,807 - DVU0908 0.56 -3.5 1,002,955 - DVU0908 0.65 -1.8 1,003,129 + DVU0908 0.75 -2.9 1,003,152 + DVU0908 0.77 -0.0 1,003,190 - DVU0908 0.79 -4.4 1,003,258 + DVU0908 0.83 -4.1 1,003,324 + DVU0908 0.87 -2.9 1,003,350 + DVU0908 0.89 -4.3 1,003,350 + DVU0908 0.89 -1.4 1,003,429 + -2.6 1,003,552 + -1.0 1,003,640 - +0.4 1,003,786 + DVU0909 0.23 +0.8 1,003,786 + DVU0909 0.23 +1.4 1,003,791 + DVU0909 0.24 +2.1 1,003,794 - DVU0909 0.25 +1.0 1,003,940 - DVU0909 0.62 +0.9 1,004,050 - DVU0909 0.89 +1.1 1,004,109 + -0.1 1,004,117 + -1.3 1,004,177 - -0.1 1,004,335 + fliM DVU0910 0.11 -0.1 1,004,452 + fliM DVU0910 0.23 -0.3 1,004,645 - fliM DVU0910 0.43 -1.3 1,004,679 - fliM DVU0910 0.46 +0.1 1,004,679 - fliM DVU0910 0.46 -0.0 1,004,688 - fliM DVU0910 0.47 +1.1 1,004,690 + fliM DVU0910 0.47 +0.4 1,004,768 - fliM DVU0910 0.55 +0.2 1,004,903 + fliM DVU0910 0.69 -0.3 1,004,945 - fliM DVU0910 0.73 +0.0 1,004,979 + fliM DVU0910 0.77 -0.8 1,005,058 - fliM DVU0910 0.85 -0.1 1,005,065 - fliM DVU0910 0.85 +0.4 1,005,083 - fliM DVU0910 0.87 -1.5
Or see this region's nucleotide sequence