Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37445

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,878,555	+		RR42_RS37440	0.50	+0.6
3,878,555	+		RR42_RS37440	0.50	-0.1
3,878,556	-		RR42_RS37440	0.50	-0.3
3,878,556	-		RR42_RS37440	0.50	-0.5
3,878,556	-		RR42_RS37440	0.50	-1.7
3,878,556	-		RR42_RS37440	0.50	+0.3
3,878,624	-		RR42_RS37440	0.54	-0.3
3,878,636	-		RR42_RS37440	0.54	+0.5
3,878,678	-		RR42_RS37440	0.57	-0.9
3,878,678	-		RR42_RS37440	0.57	+0.7
3,878,678	-		RR42_RS37440	0.57	-0.9
3,878,678	-		RR42_RS37440	0.57	-0.2
3,879,220	+		RR42_RS37440	0.86	-2.2
3,879,220	+		RR42_RS37440	0.86	+0.2
3,879,221	-		RR42_RS37440	0.86	-0.7
3,879,221	-		RR42_RS37440	0.86	+0.3
3,879,475	+				-2.0
3,879,475	+				+1.8
3,879,476	-				-0.4
3,879,479	+				+0.5
3,879,479	+				-0.4
3,879,479	+				-1.2
3,879,480	-				-0.2
3,879,480	-				-2.1
3,879,480	-				+0.4
3,879,492	-				-1.8
3,879,498	+				-0.4
3,879,499	-				+1.3
3,879,499	-				-1.7
3,879,499	-				-0.6
3,879,539	+				-0.5
3,879,569	+				+1.0
3,879,569	+				+0.6
3,879,596	+		RR42_RS37445	0.10	+0.3
3,879,597	-		RR42_RS37445	0.10	+1.7
3,879,597	-		RR42_RS37445	0.10	-0.2
3,879,618	-		RR42_RS37445	0.12	-3.2
3,879,642	-		RR42_RS37445	0.14	-0.1
3,879,678	+		RR42_RS37445	0.18	-1.5
3,879,679	-		RR42_RS37445	0.18	+0.2
3,879,679	-		RR42_RS37445	0.18	+0.6
3,879,680	+		RR42_RS37445	0.18	+0.3
3,879,766	+		RR42_RS37445	0.26	+0.8
3,879,766	+		RR42_RS37445	0.26	+1.0
3,879,767	-		RR42_RS37445	0.26	-1.5
3,879,767	-		RR42_RS37445	0.26	-1.7
3,879,780	+		RR42_RS37445	0.27	-0.2
3,879,783	-		RR42_RS37445	0.28	-1.5
3,879,815	+		RR42_RS37445	0.31	-1.0
3,879,815	+		RR42_RS37445	0.31	+0.6
3,880,016	+		RR42_RS37445	0.50	-0.9
3,880,017	-		RR42_RS37445	0.50	-1.2
3,880,082	+		RR42_RS37445	0.56	+0.1
3,880,094	+		RR42_RS37445	0.57	-0.4
3,880,094	+		RR42_RS37445	0.57	-1.2
3,880,094	+		RR42_RS37445	0.57	+0.0
3,880,094	+		RR42_RS37445	0.57	+0.2
3,880,095	-		RR42_RS37445	0.57	+1.0
3,880,100	+		RR42_RS37445	0.58	-0.9
3,880,101	-		RR42_RS37445	0.58	+0.3
3,880,202	+		RR42_RS37445	0.67	-2.1
3,880,241	+		RR42_RS37445	0.71	-1.0
3,880,242	-		RR42_RS37445	0.71	-2.2
3,880,430	+		RR42_RS37445	0.89	+0.2
3,880,552	-				+0.7
3,880,616	+				-1.8
3,880,616	+				-0.8
3,880,616	+				+0.2
3,880,616	+				-2.8
3,880,616	+				-2.7
3,880,616	+				+0.9
3,880,617	-				-1.0
3,880,617	-				+1.3
3,880,928	+		RR42_RS37450	0.15	+1.1
3,880,928	+		RR42_RS37450	0.15	-2.2
3,880,928	+		RR42_RS37450	0.15	-0.6
3,880,928	+		RR42_RS37450	0.15	-0.2
3,880,929	-		RR42_RS37450	0.15	+0.8
3,880,929	-		RR42_RS37450	0.15	-0.3
3,880,953	-		RR42_RS37450	0.18	+0.4
3,881,007	-		RR42_RS37450	0.24	-0.7
3,881,156	+		RR42_RS37450	0.40	-0.1
3,881,156	+		RR42_RS37450	0.40	-0.1
3,881,157	-		RR42_RS37450	0.41	-0.3
3,881,157	-		RR42_RS37450	0.41	+0.6
3,881,160	+		RR42_RS37450	0.41	-0.5
3,881,161	-		RR42_RS37450	0.41	-0.3
3,881,161	-		RR42_RS37450	0.41	+0.2
3,881,286	-		RR42_RS37450	0.55	-0.5