Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36705

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,691,613	+		RR42_RS36700	0.31	+0.5
3,691,815	+		RR42_RS36700	0.48	-0.6
3,691,816	-		RR42_RS36700	0.48	+0.3
3,691,816	-		RR42_RS36700	0.48	+0.7
3,692,001	-		RR42_RS36700	0.63	+0.7
3,692,001	-		RR42_RS36700	0.63	+0.7
3,692,001	-		RR42_RS36700	0.63	+0.9
3,692,437	+				+0.8
3,692,438	-				+0.0
3,692,460	+				+0.1
3,692,460	+				-0.3
3,692,461	-				-2.8
3,692,461	-				-0.2
3,692,499	+				+0.5
3,692,833	-		RR42_RS36705	0.25	-1.6
3,692,835	+		RR42_RS36705	0.25	+1.2
3,692,835	+		RR42_RS36705	0.25	+0.8
3,692,836	-		RR42_RS36705	0.25	-0.1
3,692,836	-		RR42_RS36705	0.25	+0.7
3,692,884	-		RR42_RS36705	0.29	+1.3
3,692,884	-		RR42_RS36705	0.29	+0.9
3,692,884	-		RR42_RS36705	0.29	+0.7
3,693,321	+		RR42_RS36705	0.61	+0.8
3,693,322	-		RR42_RS36705	0.61	+0.5
3,693,378	+		RR42_RS36705	0.66	+2.1
3,693,378	+		RR42_RS36705	0.66	+0.5
3,693,378	+		RR42_RS36705	0.66	+0.3
3,693,379	-		RR42_RS36705	0.66	+0.9
3,693,379	-		RR42_RS36705	0.66	-2.1
3,693,379	-		RR42_RS36705	0.66	+0.3
3,693,577	+		RR42_RS36705	0.80	+0.6
3,693,577	+		RR42_RS36705	0.80	-0.1
3,693,830	+				-0.9
3,693,830	+				-0.3
3,693,830	+				-0.3
3,693,831	-				+0.3
3,693,831	-				-1.1
3,693,831	-				-1.1
3,693,886	+				+3.0
3,693,887	-				-0.8
3,693,887	-				-0.5
3,693,898	-				-0.4
3,693,931	+				-0.6
3,693,939	-				-0.0
3,694,028	+				+0.3
3,694,107	+				+1.2
3,694,162	+				+0.2
3,694,163	-				-0.8
3,694,218	-				+0.4
3,694,276	+				-0.4
3,694,276	+				+0.3
3,694,276	+				-0.6
3,694,276	+				-0.0
3,694,276	+				+1.0
3,694,277	-				+0.5
3,694,417	+		RR42_RS36710	0.17	+0.0
3,694,418	-		RR42_RS36710	0.18	-1.0
3,694,495	+		RR42_RS36710	0.28	+0.3
3,694,565	-		RR42_RS36710	0.37	-2.1
3,694,565	-		RR42_RS36710	0.37	+0.6