Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36545

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,653,573	-		RR42_RS36540	0.25	+0.5
3,653,679	+		RR42_RS36540	0.34	-0.9
3,653,680	-		RR42_RS36540	0.34	+0.3
3,653,721	+		RR42_RS36540	0.38	+2.5
3,653,721	+		RR42_RS36540	0.38	+0.6
3,653,722	-		RR42_RS36540	0.38	-1.1
3,653,722	-		RR42_RS36540	0.38	+0.3
3,653,722	-		RR42_RS36540	0.38	-2.3
3,653,748	+		RR42_RS36540	0.40	-0.9
3,653,759	-		RR42_RS36540	0.41	-1.6
3,653,819	-		RR42_RS36540	0.46	+0.1
3,653,838	-		RR42_RS36540	0.47	+1.3
3,653,928	+		RR42_RS36540	0.54	+1.7
3,653,929	-		RR42_RS36540	0.55	+0.7
3,654,048	+		RR42_RS36540	0.64	-1.5
3,654,102	+		RR42_RS36540	0.69	+2.1
3,654,103	-		RR42_RS36540	0.69	-0.5
3,654,103	-		RR42_RS36540	0.69	-1.7
3,654,103	-		RR42_RS36540	0.69	+0.6
3,654,138	+		RR42_RS36540	0.72	-0.2
3,654,139	-		RR42_RS36540	0.72	+0.1
3,654,139	-		RR42_RS36540	0.72	+0.2
3,654,174	+		RR42_RS36540	0.75	+0.4
3,654,175	-		RR42_RS36540	0.75	+0.4
3,654,175	-		RR42_RS36540	0.75	-0.1
3,654,175	-		RR42_RS36540	0.75	-3.5
3,654,285	+		RR42_RS36540	0.84	-0.0
3,654,288	+		RR42_RS36540	0.84	-0.5
3,654,288	+		RR42_RS36540	0.84	+0.1
3,654,288	+		RR42_RS36540	0.84	-2.3
3,654,289	-		RR42_RS36540	0.84	+1.2
3,654,461	+				+0.7
3,654,508	-				+0.3
3,654,508	-				+0.9
3,654,691	-		RR42_RS36545	0.22	-0.5
3,654,720	-		RR42_RS36545	0.25	-2.4
3,655,223	+		RR42_RS36545	0.83	-0.9
3,655,223	+		RR42_RS36545	0.83	-1.1
3,655,308	-				-1.0
3,655,308	-				-2.1
3,655,791	+		RR42_RS36550	0.46	-0.6
3,655,792	-		RR42_RS36550	0.46	+0.9
3,656,064	-		RR42_RS36550	0.76	+0.1
3,656,118	-		RR42_RS36550	0.82	-1.2
3,656,259	-				+1.0
3,656,290	+				-1.3
3,656,291	-				+0.2
3,656,300	+				-0.8