Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36470

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,635,975	-		RR42_RS36465	0.44	+0.4
3,635,995	+		RR42_RS36465	0.47	-0.3
3,635,995	+		RR42_RS36465	0.47	-1.3
3,635,995	+		RR42_RS36465	0.47	+0.5
3,635,995	+		RR42_RS36465	0.47	-0.3
3,635,995	+		RR42_RS36465	0.47	-0.9
3,635,996	-		RR42_RS36465	0.47	-0.4
3,635,996	-		RR42_RS36465	0.47	+1.3
3,636,007	+		RR42_RS36465	0.49	+0.6
3,636,008	-				-2.0
3,636,008	-		RR42_RS36465	0.49	-2.3
3,636,167	-		RR42_RS36465	0.72	-1.0
3,636,167	-		RR42_RS36465	0.72	-0.9
3,636,167	-		RR42_RS36465	0.72	+0.1
3,636,172	+		RR42_RS36465	0.73	+0.3
3,636,401	+				-2.7
3,636,402	-				-0.3
3,636,402	-				-1.0
3,636,402	-				+0.0
3,637,059	+		RR42_RS36470	0.38	+0.8
3,637,089	+		RR42_RS36470	0.40	-1.3
3,637,089	+		RR42_RS36470	0.40	-1.8
3,637,089	+		RR42_RS36470	0.40	+0.7
3,637,090	-		RR42_RS36470	0.40	+0.2
3,637,090	-		RR42_RS36470	0.40	-1.7
3,637,090	-		RR42_RS36470	0.40	-0.1
3,637,311	+		RR42_RS36470	0.56	-1.2
3,637,312	-		RR42_RS36470	0.56	-0.3
3,637,471	-		RR42_RS36470	0.67	+0.1
3,637,478	-		RR42_RS36470	0.68	+0.3
3,637,478	-		RR42_RS36470	0.68	+1.2
3,637,503	+		RR42_RS36470	0.70	-1.3
3,637,668	+		RR42_RS36470	0.82	-0.8
3,637,669	-		RR42_RS36470	0.82	-1.5
3,637,821	+				+0.2
3,637,822	-				-0.4
3,637,822	-				-1.4
3,637,822	-				-1.6
3,637,822	-				+0.9
3,637,976	-				+0.9
3,637,976	-				+1.1
3,638,003	-				+1.3
3,638,003	-				+2.6
3,638,179	+		RR42_RS36475	0.16	-0.6
3,638,179	+		RR42_RS36475	0.16	-0.5
3,638,407	+		RR42_RS36475	0.31	-0.8
3,638,474	-		RR42_RS36475	0.35	+1.9
3,638,491	+		RR42_RS36475	0.36	+0.4
3,638,492	-		RR42_RS36475	0.36	-0.8
3,638,519	-		RR42_RS36475	0.38	+0.5
3,638,584	+		RR42_RS36475	0.43	-0.9
3,638,584	+		RR42_RS36475	0.43	+0.6
3,638,585	-		RR42_RS36475	0.43	-0.5
3,638,585	-		RR42_RS36475	0.43	-0.2
3,638,587	-		RR42_RS36475	0.43	+0.1
3,638,587	-		RR42_RS36475	0.43	+0.3
3,638,606	-		RR42_RS36475	0.44	-1.2
3,638,606	-		RR42_RS36475	0.44	-0.9
3,638,665	+		RR42_RS36475	0.48	-0.9
3,638,744	-		RR42_RS36475	0.53	+0.2