Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36235

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,577,830	+				+0.5
3,577,830	+				+1.1
3,578,104	-		RR42_RS36230	0.17	+0.2
3,578,104	-		RR42_RS36230	0.17	-2.1
3,578,104	-		RR42_RS36230	0.17	+0.2
3,578,527	+		RR42_RS36230	0.73	-1.0
3,578,527	+		RR42_RS36230	0.73	+0.3
3,578,527	+		RR42_RS36230	0.73	+0.7
3,578,528	-		RR42_RS36230	0.74	+0.4
3,578,528	-		RR42_RS36230	0.74	-0.6
3,578,528	-		RR42_RS36230	0.74	-0.1
3,578,528	-		RR42_RS36230	0.74	+0.5
3,578,540	-		RR42_RS36230	0.75	+0.7
3,578,659	+				+1.8
3,578,722	+				+0.5
3,578,722	+				-1.5
3,578,782	+				+0.1
3,578,782	+				-1.8
3,578,887	-		RR42_RS36235	0.15	-0.7
3,578,956	+		RR42_RS36235	0.24	-1.1
3,579,069	+		RR42_RS36235	0.38	+1.2
3,579,272	+		RR42_RS36235	0.63	-0.2
3,579,310	-		RR42_RS36235	0.68	-1.3
3,579,310	-		RR42_RS36235	0.68	+0.3
3,579,310	-		RR42_RS36235	0.68	+0.3
3,579,412	-		RR42_RS36235	0.81	-0.3
3,579,412	-		RR42_RS36235	0.81	+0.2
3,579,859	+		RR42_RS36240	0.20	+0.4
3,579,866	+		RR42_RS36240	0.21	-1.3
3,579,936	+		RR42_RS36240	0.26	+1.9
3,579,937	-		RR42_RS36240	0.26	+0.9
3,579,937	-		RR42_RS36240	0.26	-0.7
3,579,971	+		RR42_RS36240	0.28	+3.1
3,579,971	+		RR42_RS36240	0.28	-0.7
3,579,971	+		RR42_RS36240	0.28	+0.3
3,579,972	-		RR42_RS36240	0.28	+2.1
3,579,978	-		RR42_RS36240	0.28	-1.3
3,579,978	-		RR42_RS36240	0.28	+1.6
3,579,978	-		RR42_RS36240	0.28	-1.0
3,579,978	-		RR42_RS36240	0.28	-1.3
3,579,980	+		RR42_RS36240	0.29	+0.6
3,579,996	-		RR42_RS36240	0.30	+2.5
3,579,996	-		RR42_RS36240	0.30	+1.5
3,580,226	+		RR42_RS36240	0.45	-1.3
3,580,226	+		RR42_RS36240	0.45	-0.7
3,580,227	-		RR42_RS36240	0.45	-1.8
3,580,344	-		RR42_RS36240	0.53	+0.7