Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35760

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,468,349	+				+0.3
3,468,350	-				-1.9
3,468,350	-				-0.9
3,468,351	+				+0.1
3,468,351	+				-1.3
3,468,351	+				-0.1
3,468,351	+				-1.7
3,468,351	+				-1.5
3,468,352	-				+0.1
3,468,376	+				+0.7
3,468,376	+				+0.4
3,468,377	-				+0.1
3,468,616	+		RR42_RS35755	0.28	+0.5
3,468,616	+		RR42_RS35755	0.28	-0.3
3,468,616	+		RR42_RS35755	0.28	+0.5
3,468,713	-		RR42_RS35755	0.41	-0.3
3,468,742	+		RR42_RS35755	0.45	+1.2
3,468,742	+		RR42_RS35755	0.45	-0.8
3,468,743	-		RR42_RS35755	0.45	+1.3
3,468,743	-		RR42_RS35755	0.45	+0.2
3,468,849	-		RR42_RS35755	0.58	+0.8
3,469,220	-				-1.3
3,469,220	-				-1.3
3,469,220	-				-1.5
3,469,220	-				+0.5
3,469,220	-				-2.0
3,469,712	-		RR42_RS35760	0.16	-0.1
3,469,873	+		RR42_RS35760	0.23	-1.0
3,470,040	+		RR42_RS35760	0.30	-0.6
3,470,040	+		RR42_RS35760	0.30	-3.5
3,470,041	-				-1.7
3,470,392	+		RR42_RS35760	0.45	+0.3
3,470,393	-		RR42_RS35760	0.45	-0.4
3,470,393	-		RR42_RS35760	0.45	+1.6
3,470,393	-		RR42_RS35760	0.45	+0.4
3,470,650	+		RR42_RS35760	0.56	-1.6
3,470,651	-		RR42_RS35760	0.56	-0.5
3,470,653	+		RR42_RS35760	0.57	-0.1
3,470,654	-		RR42_RS35760	0.57	+1.5
3,471,010	+		RR42_RS35760	0.72	+1.3
3,471,010	+		RR42_RS35760	0.72	+1.0
3,471,011	-		RR42_RS35760	0.72	+1.0
3,471,011	-		RR42_RS35760	0.72	-0.1
3,471,647	+				-0.2
3,471,648	-				-0.3
3,471,648	-				+1.0
3,471,651	+				+0.9
3,471,652	-				+0.8
3,471,708	+				+0.1
3,471,910	-		RR42_RS35765	0.11	-0.2
3,472,152	+		RR42_RS35765	0.23	-0.4
3,472,152	+		RR42_RS35765	0.23	+0.2
3,472,319	+		RR42_RS35765	0.31	+0.5
3,472,326	-		RR42_RS35765	0.31	-2.3
3,472,503	-		RR42_RS35765	0.40	+1.3
3,472,536	+		RR42_RS35765	0.41	+0.3
3,472,544	-		RR42_RS35765	0.42	+1.1
3,472,544	-		RR42_RS35765	0.42	-0.9