Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35465

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,406,463	+				+0.1
3,406,464	-				-0.7
3,406,487	+				-0.3
3,406,488	-				+0.5
3,406,488	-				-0.3
3,406,574	+		RR42_RS35460	0.12	-0.3
3,406,575	-		RR42_RS35460	0.12	-0.8
3,406,584	+		RR42_RS35460	0.13	-0.5
3,406,745	+		RR42_RS35460	0.33	-0.4
3,406,787	+		RR42_RS35460	0.38	-0.6
3,406,787	+		RR42_RS35460	0.38	+1.9
3,406,788	-		RR42_RS35460	0.38	-0.6
3,406,800	-		RR42_RS35460	0.39	+1.3
3,407,032	-		RR42_RS35460	0.68	+0.2
3,407,052	+		RR42_RS35460	0.70	+1.2
3,407,052	+		RR42_RS35460	0.70	-0.3
3,407,053	-		RR42_RS35460	0.70	-0.3
3,407,053	-		RR42_RS35460	0.70	-0.9
3,407,053	-		RR42_RS35460	0.70	-2.5
3,407,079	+		RR42_RS35460	0.74	-0.7
3,407,079	+		RR42_RS35460	0.74	-0.3
3,407,080	-		RR42_RS35460	0.74	+1.1
3,407,207	+		RR42_RS35460	0.89	+0.2
3,407,298	-				+0.5
3,407,307	+				-1.3
3,407,307	+				+0.6
3,407,307	+				+0.2
3,407,314	+				-1.5
3,407,314	+				-2.6
3,407,314	+				+1.0
3,407,314	+				+1.0
3,407,315	-				+0.0
3,407,320	+				-0.6
3,407,372	+				-0.9
3,407,373	-				+0.5
3,407,373	-				-0.3
3,407,396	-				-1.5
3,407,431	+				+1.3
3,407,432	-				-0.7
3,407,593	+		RR42_RS35465	0.22	-1.0
3,407,628	-		RR42_RS35465	0.27	+0.8
3,407,628	-		RR42_RS35465	0.27	-0.3
3,407,643	+		RR42_RS35465	0.29	-0.7
3,407,789	+		RR42_RS35465	0.48	+0.1
3,407,789	+		RR42_RS35465	0.48	+0.2
3,407,789	+		RR42_RS35465	0.48	-2.0
3,407,789	+		RR42_RS35465	0.48	+1.0
3,407,790	-		RR42_RS35465	0.48	+1.1
3,407,790	-		RR42_RS35465	0.48	+0.2
3,407,790	-		RR42_RS35465	0.48	-0.0
3,407,790	-		RR42_RS35465	0.48	-1.3
3,407,790	-		RR42_RS35465	0.48	+1.8
3,407,791	+		RR42_RS35465	0.48	-0.2
3,407,791	+		RR42_RS35465	0.48	-0.1
3,407,791	+		RR42_RS35465	0.48	+0.6
3,407,791	+		RR42_RS35465	0.48	+0.7
3,407,791	+		RR42_RS35465	0.48	+0.3
3,407,792	-		RR42_RS35465	0.48	-2.0
3,407,792	-		RR42_RS35465	0.48	+1.0
3,407,792	-		RR42_RS35465	0.48	+2.2
3,407,901	-		RR42_RS35465	0.62	-0.7
3,407,966	+		RR42_RS35465	0.70	-1.3
3,407,967	-		RR42_RS35465	0.70	+0.5
3,408,029	+		RR42_RS35465	0.78	+0.6
3,408,029	+		RR42_RS35465	0.78	+0.1
3,408,030	-		RR42_RS35465	0.78	+1.8
3,408,058	+		RR42_RS35465	0.82	+0.0
3,408,059	-		RR42_RS35465	0.82	+0.1
3,408,059	-		RR42_RS35465	0.82	+0.3
3,408,144	-				-0.1
3,408,198	-				+0.9
3,408,247	+				+1.2
3,408,291	-				-0.8
3,408,367	+				+2.5
3,408,367	+				-1.4
3,408,367	+				-0.3
3,408,368	-				+0.3
3,408,368	-				+2.0
3,408,414	+				-1.2
3,408,422	-				+0.6
3,408,530	+				+0.2
3,408,588	+				+1.8
3,408,605	-				+1.3
3,408,605	-				+1.0
3,408,630	+				+2.6
3,408,630	+				+0.6
3,408,630	+				+0.2
3,408,631	-				-0.4
3,408,725	+				-1.7
3,408,726	-				-1.8
3,408,726	-				+0.3
3,408,750	+				+1.8
3,408,750	+				+0.3
3,408,751	-				-0.1
3,408,751	-				-0.6
3,408,846	-		RR42_RS35470	0.30	+0.4
3,408,906	-		RR42_RS35470	0.47	-0.6
3,408,953	+		RR42_RS35470	0.61	+1.1
3,408,954	-		RR42_RS35470	0.61	-1.5
3,408,966	+		RR42_RS35470	0.64	+1.2
3,408,966	+		RR42_RS35470	0.64	-1.5
3,408,967	-		RR42_RS35470	0.65	+0.2
3,409,019	-		RR42_RS35470	0.80	+0.4
3,409,019	-		RR42_RS35470	0.80	-0.1
3,409,021	-		RR42_RS35470	0.80	+0.2
3,409,045	+		RR42_RS35470	0.87	-0.2
3,409,045	+		RR42_RS35470	0.87	+1.3
3,409,045	+		RR42_RS35470	0.87	+0.5
3,409,046	-		RR42_RS35470	0.87	-1.3
3,409,046	-		RR42_RS35470	0.87	-1.7
3,409,109	+				+0.1
3,409,147	+				-0.2
3,409,165	-				+0.3
3,409,199	+				-1.5