Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35245
Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 5 mg/mL |
---|---|---|---|---|---|
remove | |||||
3,359,668 | - | RR42_RS35240 | 0.31 | -3.2 | |
3,359,869 | + | RR42_RS35240 | 0.49 | -0.1 | |
3,359,968 | + | RR42_RS35240 | 0.57 | -1.9 | |
3,360,268 | - | RR42_RS35240 | 0.84 | +1.3 | |
3,360,699 | - | RR42_RS35245 | 0.17 | +0.1 | |
3,360,701 | + | RR42_RS35245 | 0.18 | +1.3 | |
3,360,702 | - | RR42_RS35245 | 0.18 | +0.3 | |
3,360,755 | - | RR42_RS35245 | 0.22 | +0.2 | |
3,360,948 | - | RR42_RS35245 | 0.38 | +0.9 | |
3,361,179 | - | RR42_RS35245 | 0.58 | +0.3 | |
3,361,179 | - | RR42_RS35245 | 0.58 | -0.7 | |
3,361,190 | - | RR42_RS35245 | 0.59 | -0.9 | |
3,361,475 | + | RR42_RS35245 | 0.83 | +0.3 | |
3,361,645 | + | +0.1 | |||
3,361,646 | - | +0.0 | |||
3,361,729 | + | -0.2 | |||
3,361,734 | - | +0.0 | |||
3,361,734 | - | -0.4 | |||
3,361,823 | + | +0.7 | |||
3,361,824 | - | +1.5 | |||
3,362,196 | + | RR42_RS35250 | 0.29 | -0.2 | |
3,362,196 | + | RR42_RS35250 | 0.29 | +0.6 |
Or see this region's nucleotide sequence