Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35230

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,356,015	+		RR42_RS35225	0.45	+0.9
3,356,015	+		RR42_RS35225	0.45	-2.2
3,356,016	-		RR42_RS35225	0.45	+0.2
3,356,016	-		RR42_RS35225	0.45	+0.6
3,356,016	-		RR42_RS35225	0.45	-0.4
3,356,198	+		RR42_RS35225	0.56	-0.8
3,356,198	+		RR42_RS35225	0.56	-0.3
3,356,231	+		RR42_RS35225	0.58	+0.3
3,356,232	-		RR42_RS35225	0.58	-1.5
3,356,364	-		RR42_RS35225	0.65	-1.3
3,356,429	+		RR42_RS35225	0.69	-0.2
3,356,468	+		RR42_RS35225	0.71	+0.6
3,356,468	+		RR42_RS35225	0.71	-0.4
3,356,469	-		RR42_RS35225	0.71	-0.2
3,356,469	-		RR42_RS35225	0.71	+0.1
3,356,507	+		RR42_RS35225	0.74	+0.9
3,356,687	+		RR42_RS35225	0.84	-1.3
3,356,687	+		RR42_RS35225	0.84	+0.9
3,356,759	+		RR42_RS35225	0.88	+0.8
3,356,759	+		RR42_RS35225	0.88	-2.6
3,356,759	+		RR42_RS35225	0.88	-0.6
3,356,817	-				-0.4
3,356,846	+				+0.1
3,356,847	-				+1.2
3,356,929	+				+0.6
3,356,929	+				-1.1
3,356,930	-				-0.3
3,356,930	-				-0.0
3,356,930	-				+0.1
3,357,031	-				+0.3
3,357,315	+		RR42_RS35230	0.36	+1.1
3,357,315	+		RR42_RS35230	0.36	-0.9
3,357,315	+		RR42_RS35230	0.36	-2.3
3,357,315	+		RR42_RS35230	0.36	+0.1
3,357,315	+		RR42_RS35230	0.36	-0.1
3,357,316	-		RR42_RS35230	0.36	+0.8
3,357,316	-		RR42_RS35230	0.36	+0.5
3,357,316	-		RR42_RS35230	0.36	-2.2
3,357,316	-		RR42_RS35230	0.36	+0.5
3,357,316	-		RR42_RS35230	0.36	-1.0
3,357,603	+		RR42_RS35230	0.67	-0.5
3,358,022	+		RR42_RS35235	0.11	-0.3
3,358,223	+		RR42_RS35235	0.32	-1.4
3,358,358	+		RR42_RS35235	0.46	+0.2
3,358,469	+		RR42_RS35235	0.58	-0.9
3,358,859	+				-1.3
3,358,859	+				+3.9
3,358,859	+				+0.2
3,358,860	-				+0.7
3,358,860	-				-0.0
3,358,860	-				-0.3