Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34700

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,223,885	-				+0.3
3,223,938	-				+0.3
3,223,938	-				+0.3
3,223,938	-				+0.5
3,223,938	-				-0.1
3,224,081	+		RR42_RS34695	0.18	-1.0
3,224,081	+		RR42_RS34695	0.18	+2.3
3,224,081	+		RR42_RS34695	0.18	+0.8
3,224,194	+		RR42_RS34695	0.33	-0.4
3,224,194	+		RR42_RS34695	0.33	-0.0
3,224,194	+		RR42_RS34695	0.33	-0.1
3,224,195	-		RR42_RS34695	0.33	-1.9
3,224,195	-		RR42_RS34695	0.33	+0.3
3,224,195	-		RR42_RS34695	0.33	+0.6
3,224,195	-		RR42_RS34695	0.33	+0.9
3,224,195	-		RR42_RS34695	0.33	+0.4
3,224,371	-		RR42_RS34695	0.56	-2.4
3,224,535	+		RR42_RS34695	0.78	-0.2
3,224,536	-		RR42_RS34695	0.78	+0.6
3,224,536	-		RR42_RS34695	0.78	-2.1
3,224,584	+		RR42_RS34695	0.85	-0.6
3,224,946	-		RR42_RS34700	0.20	+0.5
3,225,308	-		RR42_RS34700	0.58	+0.1
3,225,335	+		RR42_RS34700	0.61	-0.8
3,225,335	+		RR42_RS34700	0.61	-1.3
3,225,335	+		RR42_RS34700	0.61	+3.6
3,225,336	-		RR42_RS34700	0.61	+0.5
3,225,482	+		RR42_RS34700	0.76	-0.2
3,225,694	+				+0.3
3,225,694	+				-0.4
3,225,694	+				-0.7
3,225,694	+				+0.3
3,225,694	+				+1.3
3,225,695	-				-0.4
3,225,695	-				+1.3
3,225,900	+				-1.6
3,225,907	-				+1.9
3,226,187	-		RR42_RS34705	0.15	-3.3
3,226,557	+		RR42_RS34705	0.31	+0.1
3,226,557	+		RR42_RS34705	0.31	-0.7
3,226,558	-		RR42_RS34705	0.31	+0.8