Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34540

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,185,863	-				+0.6
3,185,863	-				-0.2
3,185,908	+				-0.2
3,186,234	-				+0.3
3,186,462	+				+0.4
3,186,463	-				-0.6
3,186,476	+				+1.6
3,186,532	-				-0.6
3,186,716	+				+0.2
3,186,918	-				-0.3
3,186,936	+				-1.1
3,186,936	+				-0.1
3,186,949	+				-0.2
3,186,960	-				+1.0
3,187,033	-				+1.0
3,187,062	+				+0.6
3,187,108	+				-1.1
3,187,206	-		RR42_RS34540	0.14	-1.4
3,187,303	-		RR42_RS34540	0.17	-0.1
3,187,407	+		RR42_RS34540	0.21	+0.1
3,187,461	+		RR42_RS34540	0.23	+1.4
3,187,528	+		RR42_RS34540	0.25	-1.4
3,187,529	-		RR42_RS34540	0.26	-0.1
3,187,715	-		RR42_RS34540	0.32	-1.4
3,187,781	+		RR42_RS34540	0.35	-1.1
3,188,050	+		RR42_RS34540	0.45	-0.6
3,188,052	+		RR42_RS34540	0.45	-1.5
3,188,052	+		RR42_RS34540	0.45	+0.8
3,188,052	+		RR42_RS34540	0.45	+0.3
3,188,052	+		RR42_RS34540	0.45	-1.0
3,188,053	-		RR42_RS34540	0.45	-1.2
3,188,053	-		RR42_RS34540	0.45	-2.5
3,188,053	-		RR42_RS34540	0.45	+0.0
3,188,131	+		RR42_RS34540	0.48	-0.4
3,188,141	-		RR42_RS34540	0.48	+0.2
3,188,193	+		RR42_RS34540	0.50	-0.1
3,188,194	-		RR42_RS34540	0.50	+0.9
3,188,289	+		RR42_RS34540	0.54	-0.3
3,188,290	-		RR42_RS34540	0.54	-0.8
3,188,290	-		RR42_RS34540	0.54	+0.1
3,188,395	+		RR42_RS34540	0.58	-0.1
3,188,396	-		RR42_RS34540	0.58	-0.1
3,188,396	-		RR42_RS34540	0.58	+1.0
3,188,453	-		RR42_RS34540	0.60	+1.7
3,188,478	+		RR42_RS34540	0.61	+0.4
3,188,478	+		RR42_RS34540	0.61	+0.6
3,188,478	+		RR42_RS34540	0.61	-0.3
3,188,723	+		RR42_RS34540	0.70	-1.9
3,188,774	-		RR42_RS34540	0.72	-0.0
3,188,809	+		RR42_RS34540	0.73	-0.5
3,188,810	-		RR42_RS34540	0.73	-0.6
3,188,818	-		RR42_RS34540	0.73	-1.8
3,188,823	-		RR42_RS34540	0.73	-1.9
3,188,834	+		RR42_RS34540	0.74	+1.5
3,189,050	-		RR42_RS34540	0.82	-1.5
3,189,050	-		RR42_RS34540	0.82	+0.2
3,189,082	+		RR42_RS34540	0.83	+1.2
3,189,109	+		RR42_RS34540	0.84	-0.8
3,189,109	+		RR42_RS34540	0.84	+0.7
3,189,110	-		RR42_RS34540	0.84	-1.1
3,189,238	+		RR42_RS34540	0.89	-0.6
3,189,239	-		RR42_RS34540	0.89	+0.6
3,189,239	-		RR42_RS34540	0.89	+1.2
3,189,719	+				-0.6
3,189,719	+				+0.6
3,189,719	+				+1.0
3,189,720	-				-0.1
3,189,720	-				-1.7
3,189,841	+		RR42_RS34545	0.13	+0.5
3,189,841	+		RR42_RS34545	0.13	-0.9
3,189,841	+		RR42_RS34545	0.13	+0.6
3,189,841	+		RR42_RS34545	0.13	+0.4
3,189,841	+		RR42_RS34545	0.13	+0.3
3,189,904	-		RR42_RS34545	0.16	+0.2
3,189,904	-		RR42_RS34545	0.16	+0.6
3,189,999	+		RR42_RS34545	0.20	-0.8
3,190,322	+		RR42_RS34545	0.34	+1.1
3,190,323	-		RR42_RS34545	0.34	+0.1
3,190,323	-		RR42_RS34545	0.34	-0.1
3,190,365	-		RR42_RS34545	0.36	-0.6
3,190,381	-		RR42_RS34545	0.37	+1.2
3,190,498	-		RR42_RS34545	0.42	+0.5