Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34345

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,131,041	-				-0.9
3,131,041	-				-0.9
3,131,044	+				+2.4
3,131,052	-				-1.3
3,131,066	+				+1.5
3,131,072	+				+0.7
3,131,072	+				+0.8
3,131,083	+				+0.9
3,131,083	+				+1.9
3,131,083	+				+0.3
3,131,084	-				-0.2
3,131,084	-				-0.7
3,131,084	-				-0.9
3,131,088	+				-1.0
3,131,089	-				-0.3
3,131,089	-				-1.3
3,131,089	-				+1.2
3,131,094	+				+0.5
3,131,133	+				-1.2
3,131,133	+				+1.2
3,131,133	+				-2.0
3,131,133	+				+1.8
3,131,133	+				-1.5
3,131,134	-				+0.2
3,131,134	-				-0.7
3,131,153	+				-2.1
3,131,153	+				-1.8
3,131,154	-				+0.1
3,131,154	-				+0.3
3,131,154	-				-0.7
3,131,161	+				+0.7
3,131,161	+				-0.7
3,131,162	-				-0.8
3,131,162	-				-0.4
3,131,204	-		RR42_RS34340	0.19	-0.7
3,131,233	+		RR42_RS34340	0.26	-0.2
3,131,233	+		RR42_RS34340	0.26	-1.3
3,131,278	-		RR42_RS34340	0.37	+0.2
3,131,489	+		RR42_RS34340	0.86	-1.2
3,131,547	+				-0.8
3,131,547	+				+0.9
3,131,548	-				+0.1
3,131,548	-				-1.1
3,131,675	+				-0.4
3,131,844	+				-0.4
3,131,844	+				-1.1
3,131,844	+				-2.9
3,131,862	-				-0.3
3,131,862	-				-2.1
3,132,055	+		RR42_RS34345	0.36	-0.0
3,132,055	+		RR42_RS34345	0.36	+0.3
3,132,055	+		RR42_RS34345	0.36	+0.8
3,132,055	+		RR42_RS34345	0.36	+0.9
3,132,056	-		RR42_RS34345	0.36	+1.0
3,132,056	-		RR42_RS34345	0.36	-0.1
3,132,056	-		RR42_RS34345	0.36	+0.0
3,132,082	+		RR42_RS34345	0.40	-0.6
3,132,572	+				+0.9
3,132,573	-				-3.9
3,132,688	+		RR42_RS34350	0.28	-1.2
3,132,689	-		RR42_RS34350	0.28	+0.1
3,132,700	-		RR42_RS34350	0.30	+2.0
3,132,700	-		RR42_RS34350	0.30	-1.4
3,132,700	-		RR42_RS34350	0.30	-2.5
3,132,749	-		RR42_RS34350	0.41	-0.5
3,132,800	-		RR42_RS34350	0.53	-0.9
3,132,887	-		RR42_RS34350	0.73	-0.4
3,132,887	-		RR42_RS34350	0.73	-0.4
3,133,204	+		RR42_RS34355	0.15	+0.8
3,133,342	+		RR42_RS34355	0.32	+0.1
3,133,343	-		RR42_RS34355	0.32	+0.2
3,133,343	-		RR42_RS34355	0.32	+0.0
3,133,475	+		RR42_RS34355	0.49	+0.2
3,133,476	-		RR42_RS34355	0.49	-0.7
3,133,476	-		RR42_RS34355	0.49	-1.4
3,133,476	-		RR42_RS34355	0.49	-1.3
3,133,517	-		RR42_RS34355	0.54	+0.8
3,133,517	-		RR42_RS34355	0.54	+1.6