Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34005

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,057,602	-				-1.2
3,057,732	+				+0.6
3,057,764	+				-1.0
3,057,765	-				+0.8
3,057,765	-				-1.3
3,057,789	-				+0.4
3,057,812	+				-0.9
3,057,828	+				+1.1
3,057,828	+				+0.4
3,057,829	-				+0.5
3,057,829	-				+0.0
3,057,829	-				+0.7
3,057,930	+				+0.3
3,057,930	+				-1.4
3,057,931	-				+1.3
3,057,931	-				+0.2
3,057,931	-				-1.2
3,057,931	-				-0.1
3,057,931	-				-0.5
3,058,011	+				-0.1
3,058,028	+				+0.6
3,058,028	+				-0.2
3,058,029	-				-2.1
3,058,098	+				+0.8
3,058,099	-				-0.9
3,058,099	-				-1.2
3,058,125	+				-0.9
3,058,126	-				-1.0
3,058,151	+				+1.0
3,058,157	+				+0.7
3,058,157	+				-2.7
3,058,157	+				+0.1
3,058,157	+				+0.7
3,058,157	+				+0.9
3,058,158	-				+1.2
3,058,160	+				-1.1
3,058,172	+				-0.0
3,058,173	-				+0.3
3,058,173	-				+1.6
3,058,176	-				+0.2
3,058,176	-				-0.3
3,058,176	-				+0.6
3,058,203	-				+1.1
3,058,205	+				+0.2
3,058,216	-				-2.8
3,058,238	+				+0.5
3,058,238	+				-0.1
3,058,266	+				-0.7
3,058,313	+				-0.5
3,058,313	+				-2.3
3,058,414	+				-1.8
3,058,414	+				+0.3
3,058,417	+				+0.3
3,058,417	+				-1.0
3,058,417	+				-1.1
3,058,418	-				+0.2
3,058,418	-				-0.3
3,058,418	-				+0.8
3,058,418	-				+1.6
3,058,454	+				-1.3
3,058,554	+				-0.2
3,058,823	-		RR42_RS34005	0.17	+2.1
3,058,871	+		RR42_RS34005	0.20	+1.8
3,058,872	-		RR42_RS34005	0.20	-0.3
3,058,944	+		RR42_RS34005	0.25	-0.1
3,058,944	+		RR42_RS34005	0.25	+0.9
3,058,945	-		RR42_RS34005	0.25	+0.3
3,058,989	-		RR42_RS34005	0.28	+1.8
3,059,063	+		RR42_RS34005	0.33	+0.9
3,059,063	+		RR42_RS34005	0.33	+0.7
3,059,063	+		RR42_RS34005	0.33	-0.5
3,059,153	-		RR42_RS34005	0.39	+0.1
3,059,165	+		RR42_RS34005	0.39	-0.1
3,059,165	+		RR42_RS34005	0.39	+0.2
3,059,167	+		RR42_RS34005	0.39	+0.8
3,059,167	+		RR42_RS34005	0.39	-0.5
3,059,167	+		RR42_RS34005	0.39	+0.2
3,059,168	-		RR42_RS34005	0.39	+0.1
3,059,168	-		RR42_RS34005	0.39	+1.0
3,059,168	-		RR42_RS34005	0.39	-1.4
3,059,168	-		RR42_RS34005	0.39	+0.0
3,059,199	+		RR42_RS34005	0.42	+0.4
3,059,199	+		RR42_RS34005	0.42	+0.4
3,059,200	-		RR42_RS34005	0.42	+0.5
3,059,200	-		RR42_RS34005	0.42	-0.2
3,059,226	+		RR42_RS34005	0.43	+0.9
3,059,226	+		RR42_RS34005	0.43	+1.4
3,059,226	+		RR42_RS34005	0.43	+0.8
3,059,226	+		RR42_RS34005	0.43	+0.8
3,059,227	-		RR42_RS34005	0.43	-2.3
3,059,227	-		RR42_RS34005	0.43	+0.4
3,059,227	-		RR42_RS34005	0.43	-0.4
3,059,253	-		RR42_RS34005	0.45	-1.1
3,059,481	-		RR42_RS34005	0.60	+0.5
3,059,481	-		RR42_RS34005	0.60	+0.5
3,059,654	+		RR42_RS34005	0.72	-0.6
3,059,654	+		RR42_RS34005	0.72	-0.8
3,059,655	-		RR42_RS34005	0.72	-0.2
3,059,655	-		RR42_RS34005	0.72	+0.2
3,059,655	-		RR42_RS34005	0.72	+0.2
3,059,655	-		RR42_RS34005	0.72	+0.8
3,059,704	+		RR42_RS34005	0.75	+1.5
3,059,705	-		RR42_RS34005	0.75	+0.4
3,059,788	+		RR42_RS34005	0.81	-0.7
3,059,789	-		RR42_RS34005	0.81	+0.7
3,059,803	+		RR42_RS34005	0.82	+4.9
3,059,929	-		RR42_RS34005	0.90	+0.4
3,059,929	-		RR42_RS34005	0.90	-0.4
3,059,929	-		RR42_RS34005	0.90	+0.2
3,059,984	-				-1.0
3,059,984	-				+0.9
3,059,984	-				-2.5
3,060,010	+				+0.4
3,060,010	+				-0.4
3,060,105	-				+0.9
3,060,105	-				-0.8
3,060,105	-				+0.9
3,060,153	+				-2.3
3,060,153	+				+0.4
3,060,183	+				+0.3
3,060,211	-				+1.0
3,060,261	-				+0.7
3,060,484	+				-2.3
3,060,484	+				+0.5
3,060,484	+				+0.1
3,060,485	-				+1.8
3,060,485	-				-0.7
3,060,485	-				+1.8
3,060,499	+				+0.2
3,060,499	+				-1.3
3,060,500	-				-1.0
3,060,500	-				-0.7
3,060,536	-				+1.1
3,060,676	+		RR42_RS34010	0.29	-0.7
3,060,676	+		RR42_RS34010	0.29	-0.1
3,060,677	-		RR42_RS34010	0.29	+0.8
3,060,677	-		RR42_RS34010	0.29	+1.4
3,060,677	-		RR42_RS34010	0.29	-0.7
3,060,697	+		RR42_RS34010	0.33	-2.0
3,060,771	-		RR42_RS34010	0.48	+1.2
3,060,815	-		RR42_RS34010	0.57	+1.0
3,060,815	-		RR42_RS34010	0.57	-0.1
3,060,815	-		RR42_RS34010	0.57	+1.1
3,060,815	-		RR42_RS34010	0.57	-1.2
3,060,815	-		RR42_RS34010	0.57	-0.1
3,060,917	+		RR42_RS34010	0.78	+0.2
3,061,042	+				+0.4
3,061,058	+				+1.1
3,061,058	+				+0.9