Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33880

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,028,339	+		RR42_RS33875	0.26	-1.7
3,028,343	+		RR42_RS33875	0.27	-1.8
3,028,344	-		RR42_RS33875	0.27	+0.9
3,028,421	+		RR42_RS33875	0.32	+1.8
3,028,439	+		RR42_RS33875	0.34	+0.8
3,028,439	+		RR42_RS33875	0.34	-0.4
3,028,439	+		RR42_RS33875	0.34	-3.5
3,028,440	-		RR42_RS33875	0.34	-0.8
3,028,440	-		RR42_RS33875	0.34	+0.5
3,028,440	-		RR42_RS33875	0.34	+0.1
3,028,493	+		RR42_RS33875	0.38	+0.2
3,028,751	+		RR42_RS33875	0.58	+0.8
3,028,778	+		RR42_RS33875	0.60	-0.7
3,028,779	-		RR42_RS33875	0.60	+0.1
3,028,793	+		RR42_RS33875	0.61	+1.4
3,028,793	+		RR42_RS33875	0.61	+1.8
3,028,793	+		RR42_RS33875	0.61	+0.6
3,028,793	+		RR42_RS33875	0.61	+0.0
3,028,793	+		RR42_RS33875	0.61	+0.2
3,028,794	-		RR42_RS33875	0.61	-1.1
3,028,794	-		RR42_RS33875	0.61	+0.4
3,028,795	+		RR42_RS33875	0.61	+0.5
3,028,795	+		RR42_RS33875	0.61	-0.1
3,028,874	+		RR42_RS33875	0.67	+0.5
3,028,876	+		RR42_RS33875	0.67	+0.1
3,028,877	-		RR42_RS33875	0.67	-0.4
3,028,877	-		RR42_RS33875	0.67	+0.8
3,028,877	-		RR42_RS33875	0.67	+0.4
3,028,877	-		RR42_RS33875	0.67	+0.4
3,028,877	-		RR42_RS33875	0.67	-0.8
3,028,933	+		RR42_RS33875	0.72	-0.4
3,028,933	+		RR42_RS33875	0.72	+0.3
3,028,933	+		RR42_RS33875	0.72	-1.1
3,028,933	+		RR42_RS33875	0.72	+0.1
3,028,933	+		RR42_RS33875	0.72	+0.7
3,028,934	-		RR42_RS33875	0.72	+0.8
3,029,057	+		RR42_RS33875	0.81	+0.2
3,029,057	+		RR42_RS33875	0.81	-0.7
3,029,058	-		RR42_RS33875	0.81	-2.0
3,029,058	-		RR42_RS33875	0.81	-0.6
3,029,059	+		RR42_RS33875	0.81	+0.1
3,029,059	+		RR42_RS33875	0.81	+2.2
3,029,060	-		RR42_RS33875	0.81	+0.3
3,029,060	-		RR42_RS33875	0.81	-0.3
3,029,060	-		RR42_RS33875	0.81	-0.4
3,029,060	-		RR42_RS33875	0.81	+0.9
3,029,060	-		RR42_RS33875	0.81	-0.1
3,029,060	-		RR42_RS33875	0.81	-0.1
3,029,171	+		RR42_RS33875	0.90	-0.2
3,029,217	-				+0.6
3,029,217	-				-0.2
3,029,223	-				-0.8
3,029,223	-				+0.6
3,029,301	-				+0.2
3,029,301	-				+1.8
3,029,874	-		RR42_RS33880	0.57	-0.8
3,029,881	+		RR42_RS33880	0.58	+0.6
3,029,881	+		RR42_RS33880	0.58	+0.3
3,029,882	-		RR42_RS33880	0.58	-0.0
3,029,911	+		RR42_RS33880	0.61	+0.4
3,029,938	+		RR42_RS33880	0.64	+0.2
3,029,938	+		RR42_RS33880	0.64	-1.3
3,029,939	-		RR42_RS33880	0.64	-0.5
3,030,043	+		RR42_RS33880	0.75	+0.4
3,030,044	-		RR42_RS33880	0.75	+0.3
3,030,084	+		RR42_RS33880	0.79	-0.3
3,030,109	+		RR42_RS33880	0.82	-2.0
3,030,109	+		RR42_RS33880	0.82	+0.5
3,030,110	-		RR42_RS33880	0.82	-1.0
3,030,266	+				-0.4
3,030,266	+				-1.3
3,030,266	+				+0.0
3,030,319	+				+1.0
3,030,319	+				+2.1
3,030,320	-				-0.4
3,030,366	+				-0.4
3,030,367	-				+0.2
3,030,368	+				+0.3
3,030,369	-				+1.6
3,030,374	+				-0.4
3,030,375	-				-0.5
3,030,375	-				+0.6
3,030,375	-				+0.5
3,030,381	+				-2.4
3,030,381	+				+1.2
3,030,382	-				-0.3
3,030,439	+				+1.0
3,030,440	-				+0.8
3,030,665	-		RR42_RS33885	0.28	-1.4
3,030,718	+		RR42_RS33885	0.33	+1.6
3,030,718	+		RR42_RS33885	0.33	-0.4
3,030,719	-		RR42_RS33885	0.33	-0.4
3,030,719	-		RR42_RS33885	0.33	+1.5
3,030,719	-		RR42_RS33885	0.33	-0.3
3,030,719	-		RR42_RS33885	0.33	+1.5
3,030,719	-		RR42_RS33885	0.33	-2.1
3,031,078	-		RR42_RS33885	0.72	+0.1
3,031,237	+		RR42_RS33885	0.89	-0.1
3,031,275	+				+1.6