Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33450

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,922,418	+				+0.8
2,922,419	-				-1.9
2,922,421	+				-1.9
2,922,421	+				-0.4
2,922,422	-				+0.9
2,922,422	-				+0.4
2,922,429	-				-0.3
2,922,500	+				+0.4
2,922,500	+				-1.4
2,922,500	+				+0.1
2,922,500	+				-0.2
2,922,501	-				-1.1
2,922,501	-				+0.4
2,922,501	-				-0.5
2,922,589	+		RR42_RS33445	0.14	-1.1
2,922,589	+		RR42_RS33445	0.14	-0.4
2,922,590	-		RR42_RS33445	0.14	+0.6
2,922,643	-		RR42_RS33445	0.22	+0.0
2,922,657	+		RR42_RS33445	0.24	-0.6
2,922,657	+		RR42_RS33445	0.24	+1.0
2,922,657	+		RR42_RS33445	0.24	+0.2
2,922,657	+		RR42_RS33445	0.24	-0.9
2,922,658	-		RR42_RS33445	0.24	-1.1
2,922,672	+		RR42_RS33445	0.26	+0.2
2,922,681	+		RR42_RS33445	0.28	+0.1
2,922,924	+		RR42_RS33445	0.65	+0.5
2,922,924	+		RR42_RS33445	0.65	-0.0
2,922,925	-		RR42_RS33445	0.65	+0.5
2,922,925	-		RR42_RS33445	0.65	+0.9
2,922,925	-		RR42_RS33445	0.65	+0.4
2,922,925	-		RR42_RS33445	0.65	+0.8
2,922,946	-		RR42_RS33445	0.68	+0.1
2,923,050	+		RR42_RS33445	0.84	-0.2
2,923,050	+		RR42_RS33445	0.84	+0.8
2,923,223	+				-0.4
2,923,223	+				+2.1
2,923,224	-				+0.1
2,923,770	-		RR42_RS33450	0.47	-0.2
2,923,941	+		RR42_RS33450	0.62	-3.0
2,923,942	-		RR42_RS33450	0.62	-0.9
2,924,163	+		RR42_RS33450	0.81	-0.1
2,924,163	+		RR42_RS33450	0.81	+1.4
2,924,163	+		RR42_RS33450	0.81	+1.3
2,924,459	-		RR42_RS33455	0.15	-2.2
2,924,459	-		RR42_RS33455	0.15	+1.1
2,924,641	+		RR42_RS33455	0.60	-0.5
2,924,641	+		RR42_RS33455	0.60	+0.5
2,924,641	+		RR42_RS33455	0.60	-0.7
2,924,642	-		RR42_RS33455	0.60	+0.8
2,924,642	-		RR42_RS33455	0.60	-0.8
2,924,677	-		RR42_RS33455	0.69	-0.3
2,924,966	+		RR42_RS33460	0.11	-0.4
2,925,023	+		RR42_RS33460	0.16	-0.9
2,925,023	+		RR42_RS33460	0.16	-0.1
2,925,038	+		RR42_RS33460	0.17	-0.3
2,925,039	-		RR42_RS33460	0.18	+0.3
2,925,039	-		RR42_RS33460	0.18	+0.4
2,925,059	-		RR42_RS33460	0.19	-0.8
2,925,137	+		RR42_RS33460	0.27	+1.5
2,925,137	+		RR42_RS33460	0.27	-1.0
2,925,137	+		RR42_RS33460	0.27	+0.2
2,925,137	+		RR42_RS33460	0.27	-0.5
2,925,137	+		RR42_RS33460	0.27	+0.6
2,925,137	+		RR42_RS33460	0.27	+0.8
2,925,138	-		RR42_RS33460	0.27	-2.1
2,925,138	-		RR42_RS33460	0.27	-0.6
2,925,145	+		RR42_RS33460	0.27	-1.4
2,925,146	-		RR42_RS33460	0.27	-1.4
2,925,149	+		RR42_RS33460	0.28	+0.3
2,925,170	+		RR42_RS33460	0.30	-0.4
2,925,273	+		RR42_RS33460	0.39	+1.9
2,925,274	-		RR42_RS33460	0.39	+1.1
2,925,276	-		RR42_RS33460	0.39	+0.2
2,925,299	+		RR42_RS33460	0.42	-0.6
2,925,299	+		RR42_RS33460	0.42	+0.1
2,925,300	-		RR42_RS33460	0.42	+0.0
2,925,348	+		RR42_RS33460	0.46	-1.2
2,925,348	+		RR42_RS33460	0.46	-2.3
2,925,348	+		RR42_RS33460	0.46	-0.1