Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31265

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,388,016	-				+0.6
2,388,109	+		RR42_RS31260	0.18	+0.3
2,388,109	+		RR42_RS31260	0.18	+0.7
2,388,110	-		RR42_RS31260	0.18	-0.4
2,388,110	-		RR42_RS31260	0.18	+1.3
2,388,110	-		RR42_RS31260	0.18	-0.1
2,388,110	-		RR42_RS31260	0.18	+0.3
2,388,358	+		RR42_RS31260	0.50	+0.6
2,388,359	-		RR42_RS31260	0.50	-2.4
2,388,533	-		RR42_RS31260	0.72	-1.6
2,388,583	+		RR42_RS31260	0.79	+1.1
2,388,584	-		RR42_RS31260	0.79	-0.0
2,388,974	+		RR42_RS31265	0.32	+0.8
2,388,974	+		RR42_RS31265	0.32	-0.2
2,388,974	+		RR42_RS31265	0.32	-1.6
2,388,975	-		RR42_RS31265	0.32	+0.4
2,388,998	+		RR42_RS31265	0.35	+0.7
2,388,998	+		RR42_RS31265	0.35	-1.5
2,388,999	-		RR42_RS31265	0.35	+1.1
2,389,127	+		RR42_RS31265	0.53	-0.1
2,389,147	-		RR42_RS31265	0.56	-0.3
2,389,286	+		RR42_RS31265	0.75	+0.3
2,389,286	+		RR42_RS31265	0.75	+0.4
2,389,286	+		RR42_RS31265	0.75	+0.6
2,389,287	-		RR42_RS31265	0.75	+1.2
2,389,427	-				-0.9
2,389,427	-				-0.3
2,389,427	-				-3.2
2,389,487	+				+0.4
2,389,488	-				-1.9
2,389,488	-				+0.5
2,389,750	-				-0.6
2,389,762	-				-1.3
2,389,830	+				-0.1
2,389,830	+				+0.5
2,389,831	-				-0.6
2,389,831	-				-0.7
2,389,831	-				-0.1
2,389,831	-				+0.4
2,389,920	+				+1.5
2,389,921	-				-0.6
2,389,972	-				+0.3
2,390,037	-				+1.1
2,390,094	+				+0.9
2,390,376	+		RR42_RS31270	0.22	+3.9
2,390,376	+		RR42_RS31270	0.22	+2.5
2,390,376	+		RR42_RS31270	0.22	+0.5
2,390,376	+		RR42_RS31270	0.22	+2.0
2,390,377	-		RR42_RS31270	0.22	+1.6
2,390,377	-		RR42_RS31270	0.22	-0.5
2,390,461	-		RR42_RS31270	0.29	+1.3
2,390,461	-		RR42_RS31270	0.29	+0.8
2,390,461	-		RR42_RS31270	0.29	+1.6
2,390,461	-		RR42_RS31270	0.29	+2.1