Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30590

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,239,662	+		RR42_RS30585	0.47	-1.2
2,239,788	+		RR42_RS30585	0.55	+0.6
2,239,788	+		RR42_RS30585	0.55	+0.3
2,239,788	+		RR42_RS30585	0.55	+0.5
2,240,642	+		RR42_RS30590	0.11	-0.7
2,240,642	+		RR42_RS30590	0.11	-0.2
2,240,642	+		RR42_RS30590	0.11	-0.5
2,240,642	+		RR42_RS30590	0.11	-0.0
2,240,642	+		RR42_RS30590	0.11	-0.5
2,240,643	-		RR42_RS30590	0.11	-0.8
2,240,643	-		RR42_RS30590	0.11	+1.5
2,240,643	-		RR42_RS30590	0.11	-1.4
2,240,645	+		RR42_RS30590	0.11	+0.3
2,240,646	-		RR42_RS30590	0.11	+0.1
2,240,786	+		RR42_RS30590	0.27	-0.2
2,240,787	-		RR42_RS30590	0.28	+0.7
2,240,787	-		RR42_RS30590	0.28	+0.2
2,240,894	+		RR42_RS30590	0.40	-1.1
2,241,207	-		RR42_RS30590	0.76	-0.4
2,241,207	-		RR42_RS30590	0.76	+1.1
2,241,357	+				-0.2
2,241,408	+				+0.2
2,241,430	-				-0.6
2,241,476	+				+1.6
2,241,476	+				-0.7
2,241,476	+				+0.6
2,241,476	+				+0.7
2,241,476	+				-0.1
2,241,477	-				+0.9
2,241,477	-				-0.4
2,241,477	-				-2.1
2,241,477	-				+0.9
2,241,477	-				-0.4
2,241,497	+				-1.1
2,241,497	+				+0.5
2,241,498	-				-0.1
2,241,501	+				-0.9
2,241,546	-				-0.7
2,241,621	-		RR42_RS30595	0.12	-0.6
2,241,748	-		RR42_RS30595	0.33	+0.9
2,241,786	+		RR42_RS30595	0.40	-1.2
2,241,787	-		RR42_RS30595	0.40	+1.3
2,241,874	-		RR42_RS30595	0.55	+0.2
2,241,874	-		RR42_RS30595	0.55	-0.4
2,242,042	-		RR42_RS30595	0.83	-1.1
2,242,042	-		RR42_RS30595	0.83	-0.1
2,242,042	-		RR42_RS30595	0.83	-2.7
2,242,080	+		RR42_RS30595	0.90	+0.3
2,242,081	-				+0.8
2,242,081	-				-0.7
2,242,311	-				-0.1
2,242,311	-				+0.3