Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30330

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,178,582	-		RR42_RS30325	0.79	-0.2
2,178,695	+				+0.3
2,178,696	-				-2.6
2,178,696	-				-0.9
2,178,875	+				-0.1
2,178,876	-				+0.7
2,178,876	-				+0.7
2,178,876	-				-1.4
2,178,992	+				+0.5
2,178,998	+				-0.1
2,178,998	+				-2.1
2,178,998	+				-0.2
2,178,999	-				+0.9
2,178,999	-				+0.7
2,179,015	+				+1.1
2,179,015	+				-0.7
2,179,015	+				+1.1
2,179,015	+				-1.6
2,179,017	+				-0.8
2,179,017	+				+2.1
2,179,017	+				-0.5
2,179,018	-				-1.0
2,179,018	-				+0.2
2,179,018	-				+1.2
2,179,163	+				+0.7
2,179,578	+		RR42_RS30330	0.45	-0.8
2,179,579	-		RR42_RS30330	0.45	+0.2
2,179,582	+		RR42_RS30330	0.45	+0.0
2,179,582	+		RR42_RS30330	0.45	+0.2
2,179,582	+		RR42_RS30330	0.45	-1.6
2,179,583	-		RR42_RS30330	0.46	-0.2
2,179,583	-		RR42_RS30330	0.46	+0.4
2,179,748	+		RR42_RS30330	0.72	+0.4
2,179,749	-		RR42_RS30330	0.73	+0.7
2,179,749	-		RR42_RS30330	0.73	+1.7
2,179,809	+		RR42_RS30330	0.82	-0.0
2,179,809	+		RR42_RS30330	0.82	-2.9
2,179,810	-		RR42_RS30330	0.82	+0.6
2,179,868	-				-0.2
2,179,868	-				+1.3
2,180,098	+		RR42_RS30335	0.21	-0.7
2,180,099	-		RR42_RS30335	0.21	-0.3
2,180,202	+		RR42_RS30335	0.38	-1.4
2,180,202	+		RR42_RS30335	0.38	-1.1
2,180,203	-		RR42_RS30335	0.38	-0.8
2,180,249	+		RR42_RS30335	0.46	-0.4
2,180,249	+		RR42_RS30335	0.46	+0.6
2,180,250	-		RR42_RS30335	0.46	-0.4
2,180,250	-		RR42_RS30335	0.46	+0.6
2,180,250	-		RR42_RS30335	0.46	-0.2
2,180,250	-		RR42_RS30335	0.46	+0.7
2,180,250	-		RR42_RS30335	0.46	-0.7
2,180,541	+				-1.9
2,180,542	-				+1.6
2,180,603	+				-0.4
2,180,603	+				+0.1
2,180,604	-				+0.8
2,180,604	-				-3.4
2,180,604	-				-1.3
2,180,604	-				+0.4
2,180,787	+		RR42_RS30340	0.26	-0.5
2,180,904	+		RR42_RS30340	0.41	-1.9