Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29430

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,956,787	+				-0.6
1,957,065	-		RR42_RS29425	0.33	-3.3
1,957,065	-		RR42_RS29425	0.33	-0.7
1,957,252	-		RR42_RS29425	0.57	-1.9
1,957,252	-		RR42_RS29425	0.57	+0.7
1,957,252	-		RR42_RS29425	0.57	-2.5
1,957,439	+		RR42_RS29425	0.81	+0.5
1,957,439	+		RR42_RS29425	0.81	+0.3
1,957,440	-		RR42_RS29425	0.81	-1.3
1,957,440	-		RR42_RS29425	0.81	+0.5
1,957,440	-		RR42_RS29425	0.81	-1.0
1,957,487	+		RR42_RS29425	0.87	+0.7
1,957,489	+		RR42_RS29425	0.87	+0.7
1,957,586	+				-2.3
1,957,587	-				+0.1
1,957,587	-				-0.4
1,957,660	+				+0.4
1,957,660	+				+0.3
1,957,805	+				+0.9
1,957,805	+				+0.6
1,957,806	-				-1.5
1,957,964	-		RR42_RS29430	0.16	+2.1
1,958,020	+		RR42_RS29430	0.19	-0.3
1,958,021	-		RR42_RS29430	0.20	+0.5
1,958,043	-		RR42_RS29430	0.21	-1.7
1,958,043	-		RR42_RS29430	0.21	-0.0
1,958,204	+		RR42_RS29430	0.32	-0.8
1,958,204	+		RR42_RS29430	0.32	-0.6
1,958,204	+		RR42_RS29430	0.32	+1.1
1,958,205	-		RR42_RS29430	0.32	-3.5
1,958,205	-		RR42_RS29430	0.32	+0.2
1,958,205	-		RR42_RS29430	0.32	+0.6
1,958,205	-		RR42_RS29430	0.32	+0.1
1,958,621	+		RR42_RS29430	0.59	-2.2
1,958,621	+		RR42_RS29430	0.59	-2.8
1,958,811	-		RR42_RS29430	0.72	+0.2
1,958,811	-		RR42_RS29430	0.72	-1.1
1,958,846	+		RR42_RS29430	0.74	-0.5
1,958,846	+		RR42_RS29430	0.74	-1.5
1,958,847	-		RR42_RS29430	0.74	-0.1
1,958,882	+		RR42_RS29430	0.77	-0.2
1,958,882	+		RR42_RS29430	0.77	+0.0
1,958,882	+		RR42_RS29430	0.77	-1.9
1,958,883	-		RR42_RS29430	0.77	-0.1
1,958,883	-		RR42_RS29430	0.77	+1.2
1,958,903	+		RR42_RS29430	0.78	+0.3
1,958,903	+		RR42_RS29430	0.78	-0.3
1,958,903	+		RR42_RS29430	0.78	+1.1
1,958,903	+		RR42_RS29430	0.78	-0.1
1,958,904	-		RR42_RS29430	0.78	-0.1
1,958,904	-		RR42_RS29430	0.78	-0.3
1,958,904	-		RR42_RS29430	0.78	+0.4
1,958,904	-		RR42_RS29430	0.78	+0.6
1,958,904	-		RR42_RS29430	0.78	+0.3
1,958,904	-		RR42_RS29430	0.78	+0.3
1,958,907	-		RR42_RS29430	0.78	-3.0
1,958,927	+		RR42_RS29430	0.80	-0.1
1,958,958	-		RR42_RS29430	0.82	+1.8
1,958,984	+		RR42_RS29430	0.83	-0.2
1,958,985	-		RR42_RS29430	0.84	-0.9
1,959,230	+				+0.5
1,959,231	-				-1.9
1,959,231	-				-0.5
1,959,231	-				+0.2
1,959,231	-				-0.3
1,959,238	+				-2.2
1,959,239	-				+0.1
1,959,544	-		RR42_RS29435	0.34	+0.8
1,959,660	+		RR42_RS29435	0.53	-0.2
1,959,660	+		RR42_RS29435	0.53	+0.8
1,959,660	+		RR42_RS29435	0.53	-0.1
1,959,660	+		RR42_RS29435	0.53	-1.4
1,959,661	-		RR42_RS29435	0.53	-0.4
1,959,661	-		RR42_RS29435	0.53	+1.4
1,959,661	-		RR42_RS29435	0.53	+0.1
1,959,887	+				-0.5
1,959,888	-				-0.1
1,959,928	+				+0.4
1,959,929	-				-0.0
1,959,989	-				-0.2
1,960,003	-				-1.7
1,960,003	-				+0.3
1,960,003	-				+1.1
1,960,004	+				+0.4
1,960,004	+				+0.6
1,960,005	-				-0.0
1,960,005	-				-0.4
1,960,005	-				-0.2
1,960,005	-				-1.2
1,960,034	+				-0.1
1,960,043	+				-0.4
1,960,044	-				-0.1