Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28985

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,859,597	+		RR42_RS28980	0.62	+1.1
1,859,600	-		RR42_RS28980	0.62	-1.1
1,859,649	+		RR42_RS28980	0.65	+0.9
1,859,746	+		RR42_RS28980	0.70	-0.6
1,859,747	-		RR42_RS28980	0.70	+1.5
1,859,849	-		RR42_RS28980	0.76	-1.2
1,859,917	+		RR42_RS28980	0.80	-1.7
1,860,037	+		RR42_RS28980	0.87	+0.2
1,860,037	+		RR42_RS28980	0.87	+0.1
1,860,038	-		RR42_RS28980	0.87	-1.7
1,860,038	-		RR42_RS28980	0.87	+1.4
1,860,058	+		RR42_RS28980	0.88	+0.3
1,860,058	+		RR42_RS28980	0.88	+1.4
1,860,059	-		RR42_RS28980	0.88	-0.4
1,860,242	+				+0.7
1,860,514	+				+2.9
1,860,515	-				-0.2
1,860,607	-		RR42_RS28985	0.19	+0.2
1,860,607	-		RR42_RS28985	0.19	+0.9
1,860,713	-		RR42_RS28985	0.33	+0.4
1,860,750	+		RR42_RS28985	0.37	-0.2
1,860,750	+		RR42_RS28985	0.37	+2.2
1,860,751	-		RR42_RS28985	0.38	+0.0
1,860,751	-		RR42_RS28985	0.38	+0.6
1,860,927	+		RR42_RS28985	0.61	+0.9
1,860,928	-		RR42_RS28985	0.61	-0.5
1,860,930	+		RR42_RS28985	0.61	-1.1
1,860,931	-		RR42_RS28985	0.61	-1.1
1,860,931	-		RR42_RS28985	0.61	-0.7
1,860,931	-		RR42_RS28985	0.61	-1.4
1,860,931	-		RR42_RS28985	0.61	-1.2
1,860,959	+		RR42_RS28985	0.65	-0.1
1,860,959	+		RR42_RS28985	0.65	+0.9
1,861,024	-		RR42_RS28985	0.73	+0.3
1,861,027	+		RR42_RS28985	0.74	-0.8
1,861,028	-		RR42_RS28985	0.74	+0.2
1,861,028	-		RR42_RS28985	0.74	-0.4
1,861,028	-		RR42_RS28985	0.74	+1.8
1,861,028	-		RR42_RS28985	0.74	-0.7
1,861,278	+				-0.1
1,861,279	-				+0.3
1,861,279	-				+0.0
1,861,279	-				+0.4
1,861,279	-				+2.2
1,861,374	+				-0.2
1,861,374	+				-0.0
1,861,374	+				-0.1
1,861,374	+				-0.2
1,861,391	-				-0.1
1,861,395	+				-0.1
1,861,395	+				+0.3
1,861,448	+				-0.5
1,861,449	-				+1.3
1,861,540	+				-0.0
1,861,613	-				-0.4
1,861,747	+		RR42_RS28990	0.21	+1.6
1,861,747	+		RR42_RS28990	0.21	-0.1
1,861,748	-		RR42_RS28990	0.21	-0.2
1,861,748	-		RR42_RS28990	0.21	+1.3
1,861,792	-		RR42_RS28990	0.27	+0.4
1,862,042	+		RR42_RS28990	0.59	-2.7
1,862,042	+		RR42_RS28990	0.59	+1.1
1,862,043	-		RR42_RS28990	0.60	-1.1
1,862,150	+		RR42_RS28990	0.73	+0.1
1,862,151	-		RR42_RS28990	0.74	-0.7