Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28280

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,703,849	+		RR42_RS28275	0.33	-0.2
1,704,074	+		RR42_RS28275	0.62	+0.9
1,704,074	+		RR42_RS28275	0.62	-1.2
1,704,074	+		RR42_RS28275	0.62	-0.2
1,704,074	+		RR42_RS28275	0.62	-1.0
1,704,075	-		RR42_RS28275	0.62	-0.8
1,704,075	-		RR42_RS28275	0.62	+0.3
1,704,075	-		RR42_RS28275	0.62	-0.1
1,704,202	-		RR42_RS28275	0.79	-0.2
1,704,202	-		RR42_RS28275	0.79	-0.4
1,704,276	+		RR42_RS28275	0.88	+1.1
1,704,276	+		RR42_RS28275	0.88	-1.4
1,704,277	-		RR42_RS28275	0.88	+0.4
1,704,277	-		RR42_RS28275	0.88	-0.5
1,704,319	+				+1.9
1,704,392	+				+0.2
1,704,392	+				-1.1
1,704,393	-				-1.0
1,704,393	-				+0.5
1,704,452	+				-2.1
1,704,452	+				+0.3
1,704,452	+				-0.7
1,704,453	-				-2.8
1,704,453	-				+0.9
1,704,618	+				-0.4
1,704,655	-				+0.5
1,704,657	+				-2.2
1,704,657	+				-0.2
1,704,657	+				-1.0
1,704,672	+				-1.2
1,704,672	+				-0.3
1,704,672	+				-0.3
1,704,672	+				+0.2
1,704,673	-				+0.9
1,704,776	-		RR42_RS28280	0.16	-1.4
1,704,785	+		RR42_RS28280	0.17	-0.7
1,704,806	-		RR42_RS28280	0.19	-1.8
1,704,807	+		RR42_RS28280	0.19	+0.3
1,704,808	-		RR42_RS28280	0.20	-2.1
1,704,808	-		RR42_RS28280	0.20	-0.5
1,704,834	+		RR42_RS28280	0.22	-1.1
1,704,835	-		RR42_RS28280	0.22	-1.3
1,704,885	+		RR42_RS28280	0.27	+1.7
1,704,885	+		RR42_RS28280	0.27	+0.1
1,704,885	+		RR42_RS28280	0.27	-2.5
1,704,886	-		RR42_RS28280	0.27	+0.4
1,704,989	-		RR42_RS28280	0.38	-0.5
1,704,989	-		RR42_RS28280	0.38	-0.1
1,705,107	+		RR42_RS28280	0.49	+0.3
1,705,108	-		RR42_RS28280	0.49	+0.3
1,705,209	+		RR42_RS28280	0.59	-0.3
1,705,210	-		RR42_RS28280	0.59	-0.3
1,705,210	-		RR42_RS28280	0.59	-0.7
1,705,210	-		RR42_RS28280	0.59	-1.7
1,705,261	+		RR42_RS28280	0.64	-2.2
1,705,262	-		RR42_RS28280	0.65	-3.0
1,705,518	+				-1.1
1,705,519	-				-0.4
1,705,519	-				-0.2
1,705,560	+				-0.1
1,705,560	+				+0.7
1,705,560	+				+1.3
1,705,560	+				+0.9
1,705,561	-				-1.1
1,705,561	-				+1.2
1,705,561	-				-3.4
1,705,561	-				+0.5
1,705,653	+				+0.5
1,705,654	-				+0.6
1,705,796	+		RR42_RS28285	0.12	-2.7
1,705,797	-		RR42_RS28285	0.12	+0.1
1,705,826	+		RR42_RS28285	0.14	-0.5
1,705,826	+		RR42_RS28285	0.14	+0.5
1,705,910	+		RR42_RS28285	0.20	+0.3
1,705,910	+		RR42_RS28285	0.20	+0.7
1,705,990	+		RR42_RS28285	0.25	+0.1
1,706,520	+		RR42_RS28285	0.62	-0.7
1,706,520	+		RR42_RS28285	0.62	-1.1
1,706,520	+		RR42_RS28285	0.62	+0.9
1,706,521	-		RR42_RS28285	0.62	+1.2
1,706,521	-		RR42_RS28285	0.62	+0.1