Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25945

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,161,764	+		RR42_RS25940	0.17	+0.1
1,161,764	+		RR42_RS25940	0.17	-1.0
1,161,872	+		RR42_RS25940	0.29	+0.6
1,161,872	+		RR42_RS25940	0.29	-0.2
1,161,872	+		RR42_RS25940	0.29	-2.0
1,161,882	+		RR42_RS25940	0.30	-0.9
1,161,882	+		RR42_RS25940	0.30	-1.0
1,161,882	+		RR42_RS25940	0.30	+0.7
1,161,882	+		RR42_RS25940	0.30	-2.0
1,161,882	+		RR42_RS25940	0.30	-0.0
1,161,882	+		RR42_RS25940	0.30	+2.4
1,161,883	-		RR42_RS25940	0.30	-0.9
1,161,908	+		RR42_RS25940	0.33	-1.3
1,161,908	+		RR42_RS25940	0.33	+0.5
1,161,909	-		RR42_RS25940	0.33	-0.9
1,161,988	+		RR42_RS25940	0.42	-0.1
1,161,988	+		RR42_RS25940	0.42	-0.5
1,161,989	-		RR42_RS25940	0.42	-2.2
1,162,141	-		RR42_RS25940	0.58	+1.0
1,162,141	-		RR42_RS25940	0.58	-1.1
1,162,141	-		RR42_RS25940	0.58	-1.0
1,162,593	+				+1.0
1,162,594	-				+1.4
1,162,595	+				-0.2
1,162,595	+				-1.7
1,162,595	+				+0.1
1,162,596	-				-1.0
1,162,600	-				+2.4
1,162,778	-				-0.4
1,162,844	+				-0.2
1,162,845	-				-1.0
1,162,927	+		RR42_RS25945	0.15	+1.1
1,162,982	-		RR42_RS25945	0.18	-1.3
1,163,199	+		RR42_RS25945	0.31	+0.8
1,163,200	-		RR42_RS25945	0.31	-0.9
1,163,200	-		RR42_RS25945	0.31	-0.8
1,163,389	+		RR42_RS25945	0.43	-0.1
1,163,389	+		RR42_RS25945	0.43	+0.6
1,163,390	-		RR42_RS25945	0.43	+0.8
1,163,659	+		RR42_RS25945	0.60	+0.4
1,163,660	-		RR42_RS25945	0.60	+1.0
1,163,660	-		RR42_RS25945	0.60	+0.2
1,163,885	+		RR42_RS25945	0.73	+0.3
1,164,255	+				+1.7
1,164,255	+				-1.0
1,164,255	+				+0.7
1,164,255	+				-0.5
1,164,256	-				-0.0
1,164,256	-				+0.1
1,164,256	-				+0.1
1,164,579	+		RR42_RS25950	0.21	+0.4
1,164,579	+		RR42_RS25950	0.21	+0.0
1,164,580	-		RR42_RS25950	0.21	-0.7
1,164,580	-		RR42_RS25950	0.21	+0.2
1,164,580	-		RR42_RS25950	0.21	+1.1
1,164,580	-		RR42_RS25950	0.21	-0.0
1,164,580	-		RR42_RS25950	0.21	-0.8
1,164,580	-		RR42_RS25950	0.21	-0.3
1,164,580	-		RR42_RS25950	0.21	+0.7
1,164,580	-		RR42_RS25950	0.21	-0.5
1,164,580	-		RR42_RS25950	0.21	-0.5
1,164,582	+		RR42_RS25950	0.21	-3.4
1,164,582	+		RR42_RS25950	0.21	+1.1
1,164,735	+		RR42_RS25950	0.34	-0.7
1,164,735	+		RR42_RS25950	0.34	+0.2
1,164,875	+		RR42_RS25950	0.46	-0.0
1,165,218	-		RR42_RS25950	0.75	-1.3
1,165,312	-		RR42_RS25950	0.84	+0.9