Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20460

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,431,935	-		RR42_RS20455	0.20	-0.1
4,432,354	+		RR42_RS20455	0.69	+0.7
4,432,408	+		RR42_RS20455	0.75	-0.1
4,432,450	+		RR42_RS20455	0.80	-1.8
4,432,451	-		RR42_RS20455	0.80	+1.2
4,432,451	-		RR42_RS20455	0.80	+1.1
4,432,451	-		RR42_RS20455	0.80	+0.6
4,432,451	-		RR42_RS20455	0.80	-2.0
4,432,451	-		RR42_RS20455	0.80	-0.3
4,432,483	+		RR42_RS20455	0.84	-0.3
4,432,483	+		RR42_RS20455	0.84	+0.5
4,432,483	+		RR42_RS20455	0.84	-0.7
4,432,484	-		RR42_RS20455	0.84	-0.3
4,432,484	-		RR42_RS20455	0.84	+2.1
4,432,484	-		RR42_RS20455	0.84	-0.8
4,432,678	+				+1.2
4,432,704	+				-0.9
4,432,704	+				+2.2
4,432,704	+				+0.1
4,432,704	+				-0.6
4,432,705	-				+1.1
4,432,705	-				-0.5
4,432,705	-				-2.1
4,432,705	-				+0.5
4,432,708	+				+0.5
4,432,708	+				+0.1
4,432,709	-				+0.2
4,432,711	+				+0.8
4,432,806	+				+0.4
4,432,807	-				-0.6
4,433,199	+		RR42_RS20460	0.61	-2.6
4,433,227	+		RR42_RS20460	0.66	-0.9
4,433,228	-		RR42_RS20460	0.66	+0.7
4,433,365	+		RR42_RS20460	0.87	+2.5
4,433,366	-		RR42_RS20460	0.87	-0.2
4,433,366	-		RR42_RS20460	0.87	-1.7
4,433,367	+		RR42_RS20460	0.88	+0.2
4,433,367	+		RR42_RS20460	0.88	-0.9
4,433,367	+		RR42_RS20460	0.88	-0.4
4,433,367	+		RR42_RS20460	0.88	-0.0
4,433,368	-		RR42_RS20460	0.88	-0.5
4,433,368	-		RR42_RS20460	0.88	+1.5
4,433,368	-		RR42_RS20460	0.88	-0.1
4,433,368	-		RR42_RS20460	0.88	-0.1
4,433,368	-		RR42_RS20460	0.88	-1.3
4,433,434	+				-3.8
4,433,434	+				-1.4
4,433,435	-				+0.4
4,433,435	-				-0.4
4,433,469	+				-1.3
4,433,470	-				-0.1
4,433,541	+				+0.4
4,433,541	+				-0.3
4,433,541	+				-1.1
4,433,542	-				+0.2