Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20450

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,429,234	-				+0.3
4,430,200	-				-0.0
4,430,368	+		RR42_RS20450	0.14	-0.3
4,430,368	+		RR42_RS20450	0.14	-0.4
4,430,368	+		RR42_RS20450	0.14	+0.4
4,430,368	+		RR42_RS20450	0.14	-0.8
4,430,369	-		RR42_RS20450	0.14	-2.8
4,430,369	-		RR42_RS20450	0.14	+0.5
4,430,382	+		RR42_RS20450	0.15	-1.1
4,430,382	+		RR42_RS20450	0.15	-2.3
4,430,382	+		RR42_RS20450	0.15	-0.6
4,430,383	-		RR42_RS20450	0.15	-0.0
4,430,383	-		RR42_RS20450	0.15	-2.1
4,430,383	-		RR42_RS20450	0.15	+0.7
4,430,383	-		RR42_RS20450	0.15	-0.2
4,430,383	-		RR42_RS20450	0.15	-2.5
4,430,383	-		RR42_RS20450	0.15	+0.5
4,430,551	-		RR42_RS20450	0.28	-0.7
4,430,594	+		RR42_RS20450	0.31	-2.3
4,430,926	-		RR42_RS20450	0.56	-0.1
4,431,216	+		RR42_RS20450	0.77	-0.1
4,431,216	+		RR42_RS20450	0.77	+1.8
4,431,216	+		RR42_RS20450	0.77	-0.4
4,431,217	-		RR42_RS20450	0.77	-0.2
4,431,548	+				+0.4
4,431,548	+				-2.1
4,431,549	-				+0.1
4,431,658	-				+1.5
4,431,664	+				+0.4
4,431,664	+				+0.6
4,431,664	+				-0.0
4,431,664	+				-1.3
4,431,664	+				+1.3
4,431,664	+				-1.1
4,431,665	-				-0.5
4,431,760	+				-0.0
4,431,760	+				-0.2
4,431,760	+				-0.7
4,431,760	+				-0.6
4,431,760	+				-1.5
4,431,760	+				+0.8
4,431,760	+				-0.2
4,431,760	+				+1.6
4,431,761	-				+0.2
4,431,761	-				+0.5
4,431,761	-				+0.5
4,431,761	-				+0.5
4,431,761	-				+0.1
4,431,761	-				-2.5
4,431,761	-				-1.7
4,431,770	-				-0.9
4,431,770	-				-0.1
4,431,935	-		RR42_RS20455	0.20	-0.1
4,432,354	+		RR42_RS20455	0.69	+0.7
4,432,408	+		RR42_RS20455	0.75	-0.1
4,432,450	+		RR42_RS20455	0.80	-1.8
4,432,451	-		RR42_RS20455	0.80	+1.2
4,432,451	-		RR42_RS20455	0.80	+1.1
4,432,451	-		RR42_RS20455	0.80	+0.6
4,432,451	-		RR42_RS20455	0.80	-2.0
4,432,451	-		RR42_RS20455	0.80	-0.3
4,432,483	+		RR42_RS20455	0.84	-0.3
4,432,483	+		RR42_RS20455	0.84	+0.5
4,432,483	+		RR42_RS20455	0.84	-0.7
4,432,484	-		RR42_RS20455	0.84	-0.3
4,432,484	-		RR42_RS20455	0.84	+2.1
4,432,484	-		RR42_RS20455	0.84	-0.8