Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20320

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,395,455	+				-0.8
4,395,510	+				+1.0
4,395,588	-		RR42_RS20315	0.18	-0.3
4,395,629	+		RR42_RS20315	0.24	+0.7
4,395,629	+		RR42_RS20315	0.24	-0.1
4,395,629	+		RR42_RS20315	0.24	-1.1
4,395,630	-		RR42_RS20315	0.24	-1.1
4,395,630	-		RR42_RS20315	0.24	+1.0
4,395,755	+		RR42_RS20315	0.41	-0.1
4,395,756	-		RR42_RS20315	0.41	-1.7
4,395,756	-		RR42_RS20315	0.41	+0.6
4,395,756	-		RR42_RS20315	0.41	-1.1
4,395,776	+		RR42_RS20315	0.44	+1.5
4,395,776	+		RR42_RS20315	0.44	+0.8
4,395,776	+		RR42_RS20315	0.44	-0.2
4,395,776	+		RR42_RS20315	0.44	-0.7
4,395,777	-		RR42_RS20315	0.44	+0.7
4,395,777	-		RR42_RS20315	0.44	-1.5
4,395,777	-		RR42_RS20315	0.44	-0.3
4,395,777	-		RR42_RS20315	0.44	-0.9
4,395,812	+		RR42_RS20315	0.49	-0.1
4,395,813	-		RR42_RS20315	0.49	-2.0
4,395,863	+		RR42_RS20315	0.56	+2.0
4,395,863	+		RR42_RS20315	0.56	+1.4
4,395,864	-		RR42_RS20315	0.56	-0.0
4,395,933	+		RR42_RS20315	0.66	+0.5
4,395,942	+		RR42_RS20315	0.67	-0.3
4,396,038	+		RR42_RS20315	0.80	+1.9
4,396,039	-		RR42_RS20315	0.80	+0.8
4,396,101	+		RR42_RS20315	0.89	+1.5
4,396,101	+		RR42_RS20315	0.89	-0.4
4,396,102	-		RR42_RS20315	0.89	-1.1
4,396,102	-		RR42_RS20315	0.89	-0.6
4,396,102	-		RR42_RS20315	0.89	-0.0
4,396,141	+				+0.9
4,396,141	+				+0.6
4,396,141	+				-1.4
4,396,142	-				+0.2
4,396,142	-				+0.2
4,396,142	-				+0.6
4,396,151	-				-0.1
4,396,151	-				+0.7
4,396,189	+				-1.8
4,396,190	-				-0.6
4,396,190	-				-1.6
4,396,190	-				-0.1
4,396,198	+				+0.6
4,396,198	+				-0.5
4,396,198	+				-0.0
4,396,198	+				-3.7
4,396,199	-				-0.0
4,396,199	-				+0.9
4,396,199	-				+0.7
4,396,209	+				-1.7
4,396,226	-				+1.7
4,396,259	+				-0.1
4,396,261	+				-0.4
4,396,264	+				+1.2
4,396,265	-				+0.4
4,396,265	-				+0.1
4,396,273	-				-0.1
4,396,346	+				-0.3
4,396,381	-				+0.3
4,396,417	-				-0.2
4,396,417	-				-1.3
4,396,468	-				-1.1
4,396,956	-		RR42_RS20320	0.56	+0.5
4,397,087	-		RR42_RS20320	0.70	-0.0
4,397,357	+				-0.2
4,397,357	+				+0.7
4,397,412	-				+0.6
4,397,845	+		RR42_RS20325	0.38	-0.5
4,397,846	-		RR42_RS20325	0.38	+1.1
4,397,846	-		RR42_RS20325	0.38	-0.3
4,397,846	-		RR42_RS20325	0.38	+1.2
4,397,879	+		RR42_RS20325	0.41	+1.1
4,397,879	+		RR42_RS20325	0.41	+0.3
4,397,932	+		RR42_RS20325	0.47	+0.1
4,398,018	+		RR42_RS20325	0.55	-0.3
4,398,018	+		RR42_RS20325	0.55	-0.3
4,398,019	-		RR42_RS20325	0.55	-0.4
4,398,097	+		RR42_RS20325	0.63	-0.3
4,398,098	-		RR42_RS20325	0.63	+0.1
4,398,098	-		RR42_RS20325	0.63	-2.2
4,398,100	+		RR42_RS20325	0.63	-0.5
4,398,100	+		RR42_RS20325	0.63	-0.5
4,398,110	+		RR42_RS20325	0.64	-1.1
4,398,111	-		RR42_RS20325	0.64	+0.5
4,398,161	-		RR42_RS20325	0.69	-1.2
4,398,270	+		RR42_RS20325	0.80	-0.2
4,398,289	+		RR42_RS20325	0.82	+0.8
4,398,289	+		RR42_RS20325	0.82	+1.9
4,398,290	-		RR42_RS20325	0.82	+0.1
4,398,290	-		RR42_RS20325	0.82	-0.1
4,398,290	-		RR42_RS20325	0.82	-1.7
4,398,332	+		RR42_RS20325	0.86	-0.8