Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18910
Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 5 mg/mL |
---|---|---|---|---|---|
remove | |||||
4,093,785 | + | RR42_RS18900 | 0.69 | -0.6 | |
4,093,785 | + | RR42_RS18900 | 0.69 | -1.1 | |
4,093,785 | + | RR42_RS18900 | 0.69 | -0.1 | |
4,093,786 | - | RR42_RS18900 | 0.69 | -2.2 | |
4,093,869 | + | RR42_RS18900 | 0.82 | -0.4 | |
4,093,869 | + | RR42_RS18900 | 0.82 | -0.4 | |
4,093,869 | + | RR42_RS18900 | 0.82 | -0.8 | |
4,093,869 | + | RR42_RS18900 | 0.82 | +0.5 | |
4,093,870 | - | RR42_RS18900 | 0.82 | -0.1 | |
4,093,870 | - | RR42_RS18900 | 0.82 | +2.5 | |
4,093,870 | - | RR42_RS18900 | 0.82 | -0.5 | |
4,093,870 | - | RR42_RS18900 | 0.82 | +0.7 | |
4,093,870 | - | RR42_RS18900 | 0.82 | +0.3 | |
4,093,968 | + | +0.1 | |||
4,093,968 | + | -1.7 | |||
4,093,968 | + | +1.2 | |||
4,093,969 | - | -0.4 | |||
4,093,969 | - | -1.2 | |||
4,093,969 | - | -1.3 | |||
4,093,969 | - | -2.2 | |||
4,093,969 | - | +0.7 | |||
4,093,975 | - | +0.5 | |||
4,093,975 | - | -0.5 | |||
4,093,991 | + | -0.5 | |||
4,093,991 | + | -2.8 | |||
4,093,992 | - | +0.7 | |||
4,093,992 | - | +0.6 | |||
4,095,895 | + | -1.4 | |||
4,095,895 | + | -0.7 | |||
4,095,896 | - | +0.1 |
Or see this region's nucleotide sequence