Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16895

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,655,241	+		RR42_RS16890	0.80	+1.2
3,655,241	+		RR42_RS16890	0.80	+0.5
3,655,241	+		RR42_RS16890	0.80	-0.2
3,655,241	+		RR42_RS16890	0.80	+1.8
3,655,242	-		RR42_RS16890	0.80	+1.7
3,655,242	-		RR42_RS16890	0.80	+0.3
3,655,242	-		RR42_RS16890	0.80	+0.6
3,655,283	+		RR42_RS16890	0.84	-0.2
3,655,284	-		RR42_RS16890	0.84	-0.3
3,655,326	-		RR42_RS16890	0.87	+0.6
3,655,379	+				-0.1
3,655,379	+				-1.2
3,655,380	-				+0.3
3,655,380	-				-1.5
3,655,515	-				-0.4
3,655,546	+				-0.3
3,655,547	-				+0.9
3,655,587	+				+0.0
3,655,587	+				-1.0
3,655,588	-				+0.4
3,655,689	+				-2.2
3,655,689	+				+1.4
3,655,689	+				+0.6
3,655,690	-				-0.9
3,655,690	-				-0.1
3,655,902	+				+0.3
3,655,903	-				+1.0
3,655,903	-				-0.9
3,656,001	+				-0.1
3,656,001	+				-3.1
3,656,019	+				-0.3
3,656,047	+				-1.0
3,656,047	+				+0.4
3,656,047	+				-1.6
3,656,047	+				-0.1
3,656,139	-				+0.2
3,656,154	-				-0.6
3,656,154	-				-0.0
3,656,231	+		RR42_RS16895	0.12	-1.4
3,656,244	+		RR42_RS16895	0.13	-1.3
3,656,244	+		RR42_RS16895	0.13	-0.0
3,656,246	+		RR42_RS16895	0.13	+0.2
3,656,319	-		RR42_RS16895	0.22	+0.4
3,656,319	-		RR42_RS16895	0.22	-0.3
3,656,352	+		RR42_RS16895	0.26	+0.1
3,656,352	+		RR42_RS16895	0.26	-0.2
3,656,352	+		RR42_RS16895	0.26	-2.8
3,656,353	-		RR42_RS16895	0.26	-2.0
3,656,353	-		RR42_RS16895	0.26	-0.5
3,656,562	-		RR42_RS16895	0.52	-0.0
3,656,631	-		RR42_RS16895	0.61	-1.6
3,656,691	-		RR42_RS16895	0.68	+0.4
3,656,732	+		RR42_RS16895	0.73	+0.4
3,656,980	-				-1.0
3,657,310	-		RR42_RS16900	0.17	-0.4
3,657,353	+		RR42_RS16900	0.20	-1.6
3,657,512	+		RR42_RS16900	0.32	+2.6
3,657,530	-		RR42_RS16900	0.33	-0.6