Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16490

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,572,054	+		RR42_RS16485	0.67	-1.0
3,572,055	-		RR42_RS16485	0.67	-0.1
3,572,057	+		RR42_RS16485	0.67	+0.4
3,572,057	+		RR42_RS16485	0.67	+0.1
3,572,207	+		RR42_RS16485	0.79	+0.5
3,572,208	-		RR42_RS16485	0.80	-1.0
3,572,467	+				+1.0
3,572,467	+				-0.2
3,572,468	-				-1.6
3,572,656	+				-1.7
3,572,657	-				+0.4
3,572,657	-				-2.0
3,572,657	-				+0.2
3,572,657	-				-0.8
3,572,660	+				-2.2
3,572,660	+				-0.2
3,572,661	-				-0.7
3,572,700	-				+0.2
3,572,717	+				-0.8
3,572,766	+				-0.7
3,572,766	+				-1.1
3,572,794	+				-0.1
3,572,795	-				+1.3
3,573,039	+		RR42_RS16490	0.11	-0.6
3,573,040	-		RR42_RS16490	0.11	-1.3
3,573,040	-		RR42_RS16490	0.11	-1.4
3,573,040	-		RR42_RS16490	0.11	-0.1
3,573,045	+		RR42_RS16490	0.12	-2.1
3,573,045	+		RR42_RS16490	0.12	+1.5
3,573,046	-		RR42_RS16490	0.12	-0.3
3,573,285	+		RR42_RS16490	0.38	+0.3
3,573,286	-		RR42_RS16490	0.38	+0.1
3,573,286	-		RR42_RS16490	0.38	+0.4
3,573,286	-		RR42_RS16490	0.38	+0.8
3,573,286	-		RR42_RS16490	0.38	-0.5
3,573,409	-		RR42_RS16490	0.51	+0.6
3,573,479	-		RR42_RS16490	0.59	-0.4
3,573,479	-		RR42_RS16490	0.59	-0.0
3,573,751	-		RR42_RS16490	0.88	-0.9
3,573,903	-				+0.6
3,573,903	-				-0.8
3,573,927	+				+0.6
3,573,928	-				-1.1
3,573,934	+				-1.7
3,573,934	+				-1.5
3,574,041	+				+0.0
3,574,234	+		RR42_RS16495	0.26	+1.8
3,574,292	-		RR42_RS16495	0.33	+2.9
3,574,460	-		RR42_RS16495	0.54	-1.1
3,574,528	-		RR42_RS16495	0.62	+0.8
3,574,811	-				-0.3
3,574,811	-				+0.6