Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15725

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,398,855	+				-0.9
3,398,855	+				+0.1
3,398,856	-				+0.4
3,398,856	-				-1.1
3,398,918	-				+1.0
3,398,991	+				+1.1
3,398,991	+				+0.6
3,398,991	+				-0.9
3,398,991	+				-0.4
3,398,992	-				+0.8
3,398,992	-				-0.6
3,398,992	-				+1.0
3,398,992	-				-0.1
3,398,992	-				-0.2
3,399,084	+				+0.4
3,399,103	+				+0.3
3,399,103	+				+0.2
3,399,104	-				+0.7
3,399,128	-				+0.9
3,399,157	+				+0.4
3,399,157	+				+0.8
3,399,190	+				-0.1
3,399,190	+				-0.1
3,399,191	-				-1.4
3,399,191	-				+0.3
3,399,238	+				+2.1
3,399,239	-				-0.6
3,399,391	-				+0.4
3,399,436	+				-1.8
3,399,437	-				-0.4
3,399,437	-				-0.3
3,399,500	+				-1.0
3,399,500	+				+1.4
3,399,501	-				+0.1
3,399,552	-				-0.3
3,399,558	+				+0.2
3,399,601	+				-0.1
3,399,670	+				-0.1
3,399,670	+				+1.2
3,399,672	+				-0.3
3,399,685	-				+0.1
3,399,707	+				+0.1
3,399,823	-				-2.7
3,399,823	-				+0.2
3,399,828	+				-0.3
3,399,990	+		RR42_RS15725	0.24	-1.1
3,400,052	-		RR42_RS15725	0.33	+0.1
3,400,071	-		RR42_RS15725	0.36	-0.5
3,400,095	-		RR42_RS15725	0.40	-0.5
3,400,095	-		RR42_RS15725	0.40	-1.8
3,400,095	-		RR42_RS15725	0.40	-0.1
3,400,225	+		RR42_RS15725	0.60	-1.0
3,400,226	-		RR42_RS15725	0.61	-0.7
3,400,559	+				+1.2
3,400,598	-		RR42_RS15730	0.12	+4.2
3,400,598	-		RR42_RS15730	0.12	+5.1
3,400,598	-		RR42_RS15730	0.12	+1.9
3,400,610	-		RR42_RS15730	0.14	+0.9
3,400,641	-		RR42_RS15730	0.19	-1.6
3,400,642	+		RR42_RS15730	0.19	+1.9
3,400,643	-		RR42_RS15730	0.19	+3.1
3,400,643	-		RR42_RS15730	0.19	+1.8
3,400,762	+		RR42_RS15730	0.39	+2.7
3,400,774	+		RR42_RS15730	0.41	+2.1
3,400,774	+		RR42_RS15730	0.41	+2.5
3,400,775	-		RR42_RS15730	0.42	+1.1
3,400,775	-		RR42_RS15730	0.42	+3.3
3,400,775	-		RR42_RS15730	0.42	+1.7
3,400,775	-		RR42_RS15730	0.42	+2.5
3,400,858	+		RR42_RS15730	0.55	+3.2
3,400,858	+		RR42_RS15730	0.55	+1.4
3,400,890	-		RR42_RS15730	0.61	+2.6
3,400,958	+		RR42_RS15730	0.72	+1.6
3,400,958	+		RR42_RS15730	0.72	+2.5
3,400,959	-		RR42_RS15730	0.72	+1.8
3,401,059	-		RR42_RS15730	0.89	+2.1
3,401,129	-				+0.7
3,401,179	+				+3.3
3,401,187	+				+1.0
3,401,200	+				+3.0
3,401,200	+				+3.4
3,401,214	+				+2.8
3,401,271	+		RR42_RS15735	0.13	+1.8
3,401,296	-		RR42_RS15735	0.15	+2.7
3,401,296	-		RR42_RS15735	0.15	+2.5
3,401,306	-		RR42_RS15735	0.16	+2.7
3,401,385	+		RR42_RS15735	0.23	+3.2
3,401,385	+		RR42_RS15735	0.23	+3.1
3,401,405	-		RR42_RS15735	0.24	+1.2