Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15720

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,396,452	+		RR42_RS15715	0.20	+0.3
3,396,452	+		RR42_RS15715	0.20	-1.7
3,396,453	-		RR42_RS15715	0.20	+2.0
3,396,843	+		RR42_RS15715	0.56	+0.8
3,396,843	+		RR42_RS15715	0.56	+0.8
3,396,844	-		RR42_RS15715	0.56	+0.5
3,396,844	-		RR42_RS15715	0.56	+0.2
3,396,997	-		RR42_RS15715	0.70	+0.2
3,397,032	+		RR42_RS15715	0.74	-1.5
3,397,032	+		RR42_RS15715	0.74	+0.4
3,397,033	-		RR42_RS15715	0.74	+0.4
3,397,060	+		RR42_RS15715	0.76	+1.2
3,397,061	-		RR42_RS15715	0.76	-0.2
3,397,098	+		RR42_RS15715	0.80	+1.4
3,397,099	-		RR42_RS15715	0.80	+1.7
3,397,162	-		RR42_RS15715	0.86	-0.0
3,397,162	-		RR42_RS15715	0.86	+1.2
3,397,236	+				-1.0
3,397,237	-				+1.2
3,397,237	-				+0.8
3,397,237	-				+0.5
3,397,416	+				+0.7
3,397,417	-				+0.0
3,397,453	+				+1.9
3,397,453	+				-1.1
3,397,454	-				+1.9
3,397,462	+				-1.1
3,397,465	-				+0.6
3,397,468	+				-2.7
3,397,468	+				+1.2
3,397,468	+				+0.7
3,397,469	-				+1.3
3,397,469	-				+2.0
3,397,469	-				+2.7
3,397,471	+				+0.1
3,397,542	+		RR42_RS15720	0.10	+0.5
3,397,542	+		RR42_RS15720	0.10	-0.7
3,397,542	+		RR42_RS15720	0.10	+1.9
3,397,543	-		RR42_RS15720	0.10	+2.8
3,397,714	+		RR42_RS15720	0.29	+0.4
3,397,784	+		RR42_RS15720	0.36	+2.3
3,397,795	+		RR42_RS15720	0.37	+2.2
3,397,795	+		RR42_RS15720	0.37	+1.9
3,397,800	-		RR42_RS15720	0.38	+3.7
3,397,800	-		RR42_RS15720	0.38	+1.5
3,397,823	+		RR42_RS15720	0.40	+0.7
3,397,982	+		RR42_RS15720	0.57	+1.1
3,397,982	+		RR42_RS15720	0.57	+1.8
3,398,064	+		RR42_RS15720	0.66	+2.5
3,398,077	-		RR42_RS15720	0.68	+2.5
3,398,152	+		RR42_RS15720	0.76	+3.1
3,398,192	+		RR42_RS15720	0.80	+1.5
3,398,260	-		RR42_RS15720	0.87	+3.0
3,398,298	+				+3.4
3,398,421	+				-0.0
3,398,455	-				-0.3
3,398,458	+				-1.2
3,398,459	-				-3.0
3,398,459	-				+1.7
3,398,493	+				+0.7
3,398,493	+				-0.2
3,398,608	+				+0.5
3,398,620	+				+0.4
3,398,621	-				-0.5
3,398,621	-				+1.8
3,398,733	-				+0.7
3,398,733	-				+0.1
3,398,855	+				-0.9
3,398,855	+				+0.1
3,398,856	-				+0.4
3,398,856	-				-1.1
3,398,918	-				+1.0
3,398,991	+				+1.1
3,398,991	+				+0.6
3,398,991	+				-0.9
3,398,991	+				-0.4
3,398,992	-				+0.8
3,398,992	-				-0.6
3,398,992	-				+1.0
3,398,992	-				-0.1
3,398,992	-				-0.2
3,399,084	+				+0.4
3,399,103	+				+0.3
3,399,103	+				+0.2
3,399,104	-				+0.7
3,399,128	-				+0.9
3,399,157	+				+0.4
3,399,157	+				+0.8
3,399,190	+				-0.1
3,399,190	+				-0.1
3,399,191	-				-1.4
3,399,191	-				+0.3
3,399,238	+				+2.1
3,399,239	-				-0.6