Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13455

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,902,131	+		RR42_RS13445	0.86	-0.8
2,902,254	-				-0.8
2,902,254	-				-0.8
2,902,319	+				+0.6
2,902,319	+				-0.9
2,902,319	+				-0.8
2,902,320	-				+1.0
2,902,320	-				+0.5
2,902,428	+		RR42_RS13450	0.25	-0.3
2,902,428	+		RR42_RS13450	0.25	+0.1
2,902,428	+		RR42_RS13450	0.25	+0.2
2,902,428	+		RR42_RS13450	0.25	+1.2
2,902,429	-		RR42_RS13450	0.25	-0.5
2,902,429	-		RR42_RS13450	0.25	+0.2
2,902,430	+		RR42_RS13450	0.25	-0.0
2,902,430	+		RR42_RS13450	0.25	+0.8
2,902,430	+		RR42_RS13450	0.25	-1.2
2,902,430	+		RR42_RS13450	0.25	+0.2
2,902,431	-		RR42_RS13450	0.25	-1.3
2,902,431	-		RR42_RS13450	0.25	-0.4
2,902,431	-		RR42_RS13450	0.25	+0.8
2,902,431	-		RR42_RS13450	0.25	+0.6
2,902,431	-		RR42_RS13450	0.25	+0.3
2,902,431	-		RR42_RS13450	0.25	+0.8
2,902,976	+				-1.0
2,902,982	+				+1.1
2,902,983	-				+0.6
2,902,987	+				+0.2
2,902,988	-				+2.1
2,903,034	+				+0.6
2,903,034	+				-0.2
2,903,034	+				-0.8
2,903,109	+		RR42_RS13455	0.12	-3.7
2,903,109	+		RR42_RS13455	0.12	-1.3
2,903,109	+		RR42_RS13455	0.12	+0.1
2,903,114	-		RR42_RS13455	0.13	+0.1
2,903,115	+		RR42_RS13455	0.13	-2.3
2,903,115	+		RR42_RS13455	0.13	-1.1
2,903,178	+		RR42_RS13455	0.21	-2.3
2,903,607	+		RR42_RS13455	0.75	+1.3
2,903,607	+		RR42_RS13455	0.75	-0.0
2,903,607	+		RR42_RS13455	0.75	-1.4
2,903,730	+				+1.1
2,903,730	+				+0.2
2,903,731	-				-0.1
2,904,113	+		RR42_RS13460	0.29	-1.6
2,904,113	+		RR42_RS13460	0.29	+1.1
2,904,113	+		RR42_RS13460	0.29	-0.8
2,904,363	+		RR42_RS13460	0.56	+0.2
2,904,413	+		RR42_RS13460	0.62	-2.7
2,904,413	+		RR42_RS13460	0.62	+0.1
2,904,482	+		RR42_RS13460	0.70	+0.7
2,904,513	+		RR42_RS13460	0.73	-1.6
2,904,726	+				+1.4