Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13385

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,886,310	-				+1.1
2,886,333	+		RR42_RS13380	0.11	+0.4
2,886,537	+		RR42_RS13380	0.31	+1.5
2,886,537	+		RR42_RS13380	0.31	+0.6
2,886,538	-		RR42_RS13380	0.31	-0.0
2,886,581	-		RR42_RS13380	0.35	+1.2
2,886,642	+		RR42_RS13380	0.41	+0.9
2,886,643	-		RR42_RS13380	0.41	+0.7
2,886,780	+		RR42_RS13380	0.54	-0.1
2,886,958	-		RR42_RS13380	0.71	-0.1
2,887,006	-		RR42_RS13380	0.75	+0.8
2,887,006	-		RR42_RS13380	0.75	+1.5
2,887,036	-		RR42_RS13380	0.78	+0.4
2,887,036	-		RR42_RS13380	0.78	+0.8
2,887,204	+				+0.9
2,887,205	-				-0.0
2,887,205	-				+2.1
2,887,348	-				+1.9
2,887,350	+				+1.0
2,887,351	-				+1.0
2,887,351	-				+1.5
2,887,354	-				+0.9
2,887,414	-				-0.4
2,887,431	+				+0.6
2,887,431	+				+1.5
2,887,431	+				+0.2
2,887,431	+				+0.6
2,887,492	+		RR42_RS13385	0.11	+0.1
2,887,744	-		RR42_RS13385	0.25	-0.0
2,887,938	-		RR42_RS13385	0.35	+1.3
2,888,047	+		RR42_RS13385	0.41	-1.1
2,888,158	+		RR42_RS13385	0.47	+1.3
2,888,247	+		RR42_RS13385	0.51	+0.2
2,888,248	-		RR42_RS13385	0.51	-0.5
2,888,248	-		RR42_RS13385	0.51	-0.3
2,888,248	-		RR42_RS13385	0.51	+0.1
2,888,255	-		RR42_RS13385	0.52	+1.3
2,888,274	+		RR42_RS13385	0.53	-0.6
2,888,274	+		RR42_RS13385	0.53	-1.4
2,888,338	-		RR42_RS13385	0.56	+0.1
2,888,461	-		RR42_RS13385	0.63	+0.7
2,888,595	-		RR42_RS13385	0.70	+0.1
2,888,685	+		RR42_RS13385	0.75	-0.1
2,888,685	+		RR42_RS13385	0.75	+1.4
2,888,691	+		RR42_RS13385	0.75	+0.5
2,888,692	-		RR42_RS13385	0.75	-0.9
2,888,692	-		RR42_RS13385	0.75	+0.3
2,888,692	-		RR42_RS13385	0.75	-0.2
2,888,884	+		RR42_RS13385	0.85	+1.3
2,888,885	-		RR42_RS13385	0.85	-0.2
2,889,009	+				+0.5
2,889,010	-				-0.2
2,889,024	+				-0.9
2,889,025	-				+0.9
2,889,145	+				+1.1
2,889,157	+				-0.1
2,889,223	+				-0.2
2,889,236	+				+2.6
2,889,236	+				+0.4
2,889,237	-				-0.2
2,889,237	-				-0.1
2,889,237	-				-0.3
2,889,402	-				+0.9
2,889,465	+				+0.3
2,889,466	-				-0.1
2,889,466	-				+1.4
2,889,516	+		RR42_RS13390	0.14	+0.8
2,889,516	+		RR42_RS13390	0.14	-0.7
2,889,516	+		RR42_RS13390	0.14	-1.0
2,889,516	+		RR42_RS13390	0.14	+0.3
2,889,516	+		RR42_RS13390	0.14	+0.3
2,889,517	-		RR42_RS13390	0.15	-3.0
2,889,517	-		RR42_RS13390	0.15	+0.1
2,889,517	-		RR42_RS13390	0.15	-0.7
2,889,517	-		RR42_RS13390	0.15	+0.3
2,889,581	-		RR42_RS13390	0.23	-0.1
2,889,765	+		RR42_RS13390	0.46	-2.2
2,889,838	-		RR42_RS13390	0.55	-0.0
2,889,838	-		RR42_RS13390	0.55	-1.5
2,889,838	-		RR42_RS13390	0.55	+0.8
2,889,868	-		RR42_RS13390	0.59	-4.1
2,889,915	+		RR42_RS13390	0.65	+0.1
2,889,915	+		RR42_RS13390	0.65	-0.5
2,890,137	+				-0.1
2,890,137	+				-0.1
2,890,137	+				-1.3
2,890,138	-				+0.4
2,890,138	-				-1.5
2,890,138	-				+0.1
2,890,157	+				+2.3
2,890,157	+				-0.1
2,890,157	+				+0.0
2,890,158	-				+1.9