Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13245

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,851,495	+		RR42_RS13240	0.29	+0.5
2,851,496	-		RR42_RS13240	0.29	-0.5
2,851,609	+		RR42_RS13240	0.43	-0.9
2,851,610	-		RR42_RS13240	0.43	+0.4
2,851,610	-		RR42_RS13240	0.43	-0.8
2,851,820	+		RR42_RS13240	0.69	+0.9
2,851,821	-		RR42_RS13240	0.69	+0.5
2,851,867	+		RR42_RS13240	0.75	+1.2
2,851,913	+		RR42_RS13240	0.80	-0.5
2,851,998	+				+0.0
2,852,000	+				+1.1
2,852,001	-				-0.2
2,852,011	-				+0.3
2,852,145	+				+1.1
2,852,148	+				-1.5
2,852,149	-				-0.5
2,852,269	+				+1.4
2,852,269	+				-2.1
2,852,269	+				+0.6
2,852,269	+				+1.1
2,852,269	+				+0.5
2,852,269	+				+1.4
2,852,275	+				-0.0
2,852,275	+				+0.1
2,852,477	-		RR42_RS13245	0.20	+0.4
2,852,477	-		RR42_RS13245	0.20	+0.7
2,852,477	-		RR42_RS13245	0.20	+0.9
2,852,605	+		RR42_RS13245	0.32	-0.3
2,852,606	-		RR42_RS13245	0.32	+0.2
2,853,014	+		RR42_RS13245	0.71	+2.6
2,853,014	+		RR42_RS13245	0.71	-0.6
2,853,014	+		RR42_RS13245	0.71	+0.3
2,853,015	-		RR42_RS13245	0.71	+0.9
2,853,015	-		RR42_RS13245	0.71	-0.6
2,853,015	-		RR42_RS13245	0.71	-0.5
2,853,025	+		RR42_RS13245	0.72	-3.1
2,853,130	+		RR42_RS13245	0.82	+0.1
2,853,163	+		RR42_RS13245	0.85	-0.9
2,853,166	+		RR42_RS13245	0.86	+0.6
2,853,166	+		RR42_RS13245	0.86	-2.1
2,853,167	-		RR42_RS13245	0.86	+0.2
2,853,167	-		RR42_RS13245	0.86	+0.3
2,853,308	+				-0.0
2,853,310	+				+0.5
2,853,310	+				-0.3
2,853,311	-				+2.1
2,853,377	+				+1.1
2,853,377	+				+1.5
2,853,378	-				-0.3
2,853,388	+				+0.4
2,853,388	+				+0.5
2,853,388	+				-0.5
2,853,389	-				+1.4
2,853,389	-				+0.5
2,853,455	+				-0.8
2,853,455	+				-0.9
2,853,456	-				-0.6
2,853,456	-				+2.6
2,853,456	-				-0.8
2,853,456	-				+0.1
2,853,497	+				+0.1
2,853,498	-				-1.6
2,853,523	-				-0.3
2,853,523	-				-0.0
2,853,612	+				+0.9
2,853,757	-		RR42_RS13250	0.22	+1.3
2,853,757	-		RR42_RS13250	0.22	+3.1
2,853,757	-		RR42_RS13250	0.22	+0.4
2,853,968	+		RR42_RS13250	0.44	-1.3
2,853,970	-		RR42_RS13250	0.44	+0.8
2,853,970	-		RR42_RS13250	0.44	+0.6
2,853,970	-		RR42_RS13250	0.44	+1.3
2,853,970	-		RR42_RS13250	0.44	+1.3
2,854,056	+		RR42_RS13250	0.53	+0.1
2,854,087	-		RR42_RS13250	0.57	+2.0
2,854,087	-		RR42_RS13250	0.57	+1.1
2,854,258	-		RR42_RS13250	0.75	+1.1