Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13185

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,839,801	-				+0.0
2,839,801	-				-0.1
2,839,803	-				-1.1
2,839,822	-				+1.2
2,839,846	+				-1.0
2,839,912	+				-0.5
2,840,023	+		RR42_RS13180	0.21	+1.6
2,840,032	+		RR42_RS13180	0.22	+0.2
2,840,033	-		RR42_RS13180	0.22	+1.1
2,840,033	-		RR42_RS13180	0.22	-1.7
2,840,033	-		RR42_RS13180	0.22	+0.1
2,840,036	+		RR42_RS13180	0.22	+0.3
2,840,036	+		RR42_RS13180	0.22	+0.3
2,840,036	+		RR42_RS13180	0.22	-1.5
2,840,036	+		RR42_RS13180	0.22	-2.5
2,840,059	+		RR42_RS13180	0.25	-0.1
2,840,092	+		RR42_RS13180	0.29	+0.3
2,840,188	+		RR42_RS13180	0.40	+0.1
2,840,188	+		RR42_RS13180	0.40	+0.5
2,840,189	-		RR42_RS13180	0.41	-0.7
2,840,242	+		RR42_RS13180	0.47	-0.9
2,840,242	+		RR42_RS13180	0.47	+0.4
2,840,243	-		RR42_RS13180	0.47	+0.4
2,840,243	-		RR42_RS13180	0.47	-1.2
2,840,243	-		RR42_RS13180	0.47	-0.4
2,840,243	-		RR42_RS13180	0.47	-1.5
2,840,300	-		RR42_RS13180	0.54	+0.8
2,840,335	+		RR42_RS13180	0.58	-1.0
2,840,335	+		RR42_RS13180	0.58	-0.4
2,840,392	+		RR42_RS13180	0.64	+0.2
2,840,410	+		RR42_RS13180	0.67	-0.1
2,840,537	-		RR42_RS13180	0.82	-0.5
2,840,537	-		RR42_RS13180	0.82	-1.0
2,840,693	+				+1.5
2,840,693	+				+0.2
2,840,693	+				+1.2
2,840,693	+				+1.5
2,840,694	-				+1.0
2,840,694	-				+1.4
2,840,836	+		RR42_RS13185	0.12	+0.0
2,840,863	-		RR42_RS13185	0.15	+1.4
2,840,863	-		RR42_RS13185	0.15	+1.3
2,840,863	-		RR42_RS13185	0.15	+2.0
2,841,249	+		RR42_RS13185	0.47	+2.7
2,841,249	+		RR42_RS13185	0.47	+0.9
2,841,250	-		RR42_RS13185	0.47	+0.5
2,841,250	-		RR42_RS13185	0.47	+3.0
2,841,262	-		RR42_RS13185	0.49	+1.0
2,841,357	+		RR42_RS13185	0.57	+1.7
2,841,358	-		RR42_RS13185	0.57	+1.2
2,841,502	-		RR42_RS13185	0.69	+2.6
2,841,502	-		RR42_RS13185	0.69	+1.2
2,841,502	-		RR42_RS13185	0.69	+1.0
2,841,502	-		RR42_RS13185	0.69	+1.3
2,841,748	-		RR42_RS13185	0.90	+2.5
2,841,892	-				-1.5
2,841,892	-				-0.1
2,841,926	+				+2.3
2,842,050	+		RR42_RS13190	0.20	+1.3
2,842,050	+		RR42_RS13190	0.20	+1.5
2,842,050	+		RR42_RS13190	0.20	+1.6
2,842,050	+		RR42_RS13190	0.20	+2.3
2,842,051	-		RR42_RS13190	0.21	+1.6
2,842,051	-		RR42_RS13190	0.21	-1.3
2,842,051	-		RR42_RS13190	0.21	+1.0
2,842,054	+		RR42_RS13190	0.21	+1.6
2,842,054	+		RR42_RS13190	0.21	+3.5
2,842,055	-		RR42_RS13190	0.21	+0.6
2,842,055	-		RR42_RS13190	0.21	+2.8
2,842,055	-		RR42_RS13190	0.21	+2.9
2,842,549	-		RR42_RS13190	0.79	-2.0
2,842,721	-				-2.1
2,842,721	-				-2.3
2,842,721	-				-0.5
2,842,721	-				+0.0
2,842,729	+				+0.6
2,842,729	+				+0.8
2,842,729	+				-2.0
2,842,729	+				+0.8
2,842,730	-				+2.0
2,842,730	-				-0.3
2,842,743	+				+1.6
2,842,743	+				+0.2
2,842,744	-				-0.7
2,842,744	-				+0.5
2,842,828	+		RR42_RS13195	0.10	-0.2
2,842,828	+		RR42_RS13195	0.10	-1.1
2,842,828	+		RR42_RS13195	0.10	+0.3
2,842,828	+		RR42_RS13195	0.10	-0.9
2,842,828	+		RR42_RS13195	0.10	+0.3
2,842,829	-		RR42_RS13195	0.10	+0.3