Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12935

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRR42_RS12930 and RR42_RS12935 are separated by 143 nucleotidesRR42_RS12935 and RR42_RS12940 are separated by 97 nucleotides RR42_RS12930: RR42_RS12930 - dihydrolipoamide dehydrogenase, at 2,779,394 to 2,780,830 _RS12930 RR42_RS12935: RR42_RS12935 - dihydrolipoamide succinyltransferase, at 2,780,974 to 2,782,221 _RS12935 RR42_RS12940: RR42_RS12940 - 2-oxoglutarate dehydrogenase, at 2,782,319 to 2,785,174 _RS12940 Position (kb) 2780 2781 2782 2783Strain fitness (log2 ratio) -1 0 1at 2780.976 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
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2,780,976 - +0.7

Or see this region's nucleotide sequence