Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12470

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,681,198	+		RR42_RS12465	0.71	+1.2
2,681,198	+		RR42_RS12465	0.71	+0.1
2,681,199	-		RR42_RS12465	0.71	+0.6
2,681,199	-		RR42_RS12465	0.71	-0.3
2,681,338	+		RR42_RS12465	0.77	+0.6
2,681,378	+		RR42_RS12465	0.79	-1.6
2,681,379	-		RR42_RS12465	0.79	-0.2
2,681,444	+		RR42_RS12465	0.82	-2.3
2,681,457	-		RR42_RS12465	0.83	+0.3
2,681,501	+		RR42_RS12465	0.85	+0.0
2,681,501	+		RR42_RS12465	0.85	-0.3
2,681,501	+		RR42_RS12465	0.85	-0.5
2,681,501	+		RR42_RS12465	0.85	-0.1
2,681,502	-		RR42_RS12465	0.85	-0.6
2,681,627	+				+2.0
2,681,653	-				+1.0
2,681,668	-				-0.3
2,681,860	+				+0.4
2,682,036	+				-2.2
2,682,037	-				+1.1
2,682,037	-				+1.4
2,682,037	-				+0.8
2,682,037	-				-1.4
2,682,037	-				-1.6
2,682,236	-		RR42_RS12470	0.19	+0.2
2,682,236	-		RR42_RS12470	0.19	+1.0
2,682,264	+		RR42_RS12470	0.21	+0.0
2,682,264	+		RR42_RS12470	0.21	-1.0
2,682,264	+		RR42_RS12470	0.21	+0.6
2,682,264	+		RR42_RS12470	0.21	+0.3
2,682,264	+		RR42_RS12470	0.21	-0.2
2,682,264	+		RR42_RS12470	0.21	+1.0
2,682,265	-		RR42_RS12470	0.21	+0.5
2,682,268	-		RR42_RS12470	0.21	+1.0
2,682,288	+		RR42_RS12470	0.23	-2.5
2,682,288	+		RR42_RS12470	0.23	-2.3
2,682,289	-		RR42_RS12470	0.23	-2.3
2,682,289	-		RR42_RS12470	0.23	+0.0
2,682,307	-		RR42_RS12470	0.24	-0.3
2,682,576	+		RR42_RS12470	0.41	-2.6
2,682,622	+		RR42_RS12470	0.44	-1.6
2,682,622	+		RR42_RS12470	0.44	+1.0
2,682,622	+		RR42_RS12470	0.44	+0.5
2,682,622	+		RR42_RS12470	0.44	-1.1
2,682,623	-		RR42_RS12470	0.44	+1.0
2,682,623	-		RR42_RS12470	0.44	+1.4
2,682,681	+		RR42_RS12470	0.48	-0.5
2,682,682	-		RR42_RS12470	0.48	-1.8
2,682,833	-		RR42_RS12470	0.58	-0.7
2,682,925	-		RR42_RS12470	0.64	+0.8
2,682,969	+		RR42_RS12470	0.67	+1.0
2,682,969	+		RR42_RS12470	0.67	-2.0
2,682,970	-		RR42_RS12470	0.67	+0.2
2,683,104	-		RR42_RS12470	0.75	-0.6
2,683,270	-		RR42_RS12470	0.86	-1.8
2,683,354	-				+0.0
2,683,393	-				+0.1
2,683,444	+				+0.7
2,683,444	+				+1.4
2,683,445	-				-0.9
2,683,475	+				+0.9
2,683,476	-				-2.5
2,683,479	+				-0.3
2,683,479	+				+1.4
2,683,479	+				+0.5
2,683,479	+				+0.3
2,683,479	+				+0.4
2,683,479	+				-0.8
2,683,480	-				-0.5
2,683,480	-				+0.2
2,683,480	-				+0.4
2,683,480	-				-1.5
2,683,532	+				-2.0
2,683,533	-				-0.1
2,683,611	-				+1.7
2,683,611	-				-1.6
2,683,626	+				-1.1
2,683,733	+		RR42_RS12475	0.17	-0.8
2,683,733	+		RR42_RS12475	0.17	+0.2
2,683,733	+		RR42_RS12475	0.17	-0.3
2,683,733	+		RR42_RS12475	0.17	-0.9
2,683,937	+		RR42_RS12475	0.36	-0.0
2,683,937	+		RR42_RS12475	0.36	-0.2
2,683,938	-		RR42_RS12475	0.36	+0.1
2,684,072	+		RR42_RS12475	0.49	+1.0
2,684,072	+		RR42_RS12475	0.49	-0.1
2,684,073	-		RR42_RS12475	0.49	+0.4
2,684,075	+		RR42_RS12475	0.49	-0.6
2,684,441	+		RR42_RS12475	0.83	-1.7