Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12345

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,648,606	+		RR42_RS12340	0.43	-0.7
2,648,606	+		RR42_RS12340	0.43	-0.5
2,648,606	+		RR42_RS12340	0.43	+0.3
2,648,606	+		RR42_RS12340	0.43	+0.6
2,648,607	-		RR42_RS12340	0.43	-0.6
2,648,791	+		RR42_RS12340	0.62	+0.6
2,648,792	-		RR42_RS12340	0.62	+0.9
2,648,837	+		RR42_RS12340	0.67	-1.3
2,648,838	-		RR42_RS12340	0.67	-0.8
2,648,838	-		RR42_RS12340	0.67	+0.6
2,648,838	-		RR42_RS12340	0.67	-0.3
2,648,841	+		RR42_RS12340	0.67	-0.7
2,648,857	-		RR42_RS12340	0.69	+0.4
2,649,180	+				-1.3
2,649,181	-				-0.3
2,649,233	+				-0.3
2,649,234	-				+1.2
2,649,257	+				-0.2
2,649,258	-				+0.7
2,649,698	-		RR42_RS12345	0.25	+0.2
2,649,876	+		RR42_RS12345	0.58	-0.5
2,650,104	+				+0.5
2,650,156	+				+0.5
2,650,208	+				-0.2
2,650,208	+				-0.4
2,650,210	+				-1.0
2,650,210	+				-1.0
2,650,210	+				+0.9
2,650,299	-		RR42_RS12350	0.13	-1.3
2,650,316	+		RR42_RS12350	0.18	+0.0
2,650,316	+		RR42_RS12350	0.18	+0.0
2,650,316	+		RR42_RS12350	0.18	-1.2
2,650,317	-		RR42_RS12350	0.19	+0.1
2,650,317	-		RR42_RS12350	0.19	-2.8
2,650,317	-		RR42_RS12350	0.19	-0.4
2,650,317	-		RR42_RS12350	0.19	+0.5
2,650,317	-		RR42_RS12350	0.19	+1.0
2,650,317	-		RR42_RS12350	0.19	+1.5
2,650,757	-		RR42_RS12355	0.17	+0.7
2,650,769	+		RR42_RS12355	0.18	+1.5
2,650,818	+		RR42_RS12355	0.23	+1.2
2,650,819	-		RR42_RS12355	0.24	-1.0
2,650,830	-		RR42_RS12355	0.25	-1.5
2,650,897	+		RR42_RS12355	0.32	+0.0
2,650,898	-		RR42_RS12355	0.32	+1.7
2,650,898	-		RR42_RS12355	0.32	+0.2
2,651,076	-		RR42_RS12355	0.52	+0.2
2,651,076	-		RR42_RS12355	0.52	+0.7