Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11535

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,465,211	+				+0.6
2,465,212	-				-0.8
2,465,298	-				+0.8
2,465,355	-		RR42_RS11530	0.13	-1.2
2,465,355	-		RR42_RS11530	0.13	-0.7
2,465,878	+				-1.2
2,466,226	+		RR42_RS11535	0.21	-0.9
2,466,227	-		RR42_RS11535	0.21	+0.8
2,466,227	-		RR42_RS11535	0.21	-1.6
2,466,280	+		RR42_RS11535	0.25	+0.4
2,466,280	+		RR42_RS11535	0.25	-0.7
2,466,281	-		RR42_RS11535	0.25	-1.4
2,466,281	-		RR42_RS11535	0.25	-1.0
2,466,499	+		RR42_RS11535	0.41	-0.9
2,466,715	+		RR42_RS11535	0.56	+1.5
2,466,715	+		RR42_RS11535	0.56	-0.5
2,466,715	+		RR42_RS11535	0.56	+0.4
2,466,716	-		RR42_RS11535	0.57	+0.4
2,466,716	-		RR42_RS11535	0.57	-2.0
2,466,716	-		RR42_RS11535	0.57	+0.1
2,466,730	+		RR42_RS11535	0.58	-1.5
2,466,818	-		RR42_RS11535	0.64	-2.0
2,466,818	-		RR42_RS11535	0.64	-0.5
2,466,904	+		RR42_RS11535	0.70	-2.3
2,467,004	+		RR42_RS11535	0.78	+0.5
2,467,311	+				+0.7
2,467,312	-				-0.3
2,467,312	-				-1.3
2,467,344	-				-0.2
2,467,387	-				+0.3
2,467,673	-				-1.1
2,467,722	+				-0.4
2,467,723	-				+0.4
2,467,723	-				+0.5
2,467,857	+		RR42_RS11540	0.14	-0.2
2,467,907	+		RR42_RS11540	0.16	+1.0
2,467,908	-		RR42_RS11540	0.16	+0.0
2,467,912	-		RR42_RS11540	0.16	-1.8
2,468,106	+		RR42_RS11540	0.24	+0.1
2,468,106	+		RR42_RS11540	0.24	+0.6
2,468,106	+		RR42_RS11540	0.24	-1.8