Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10845

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,318,352	+		RR42_RS10835	0.35	+2.1
2,318,352	+		RR42_RS10835	0.35	-0.6
2,318,394	+		RR42_RS10835	0.43	-0.2
2,318,625	+		RR42_RS10835	0.86	-0.5
2,318,626	-		RR42_RS10835	0.86	-0.6
2,318,835	+		RR42_RS10840	0.23	+0.7
2,318,835	+		RR42_RS10840	0.23	-0.6
2,318,836	-		RR42_RS10840	0.23	+0.6
2,318,843	+		RR42_RS10840	0.24	-1.2
2,318,843	+		RR42_RS10840	0.24	-0.2
2,318,844	-		RR42_RS10840	0.24	-0.5
2,318,844	-		RR42_RS10840	0.24	+0.5
2,318,846	+		RR42_RS10840	0.25	+1.1
2,318,847	-		RR42_RS10840	0.25	-1.6
2,318,913	-		RR42_RS10840	0.36	-0.0
2,318,913	-		RR42_RS10840	0.36	+1.0
2,318,913	-		RR42_RS10840	0.36	+1.5
2,318,987	+		RR42_RS10840	0.48	+1.1
2,318,987	+		RR42_RS10840	0.48	+0.8
2,318,987	+		RR42_RS10840	0.48	-0.8
2,318,987	+		RR42_RS10840	0.48	+2.0
2,318,987	+		RR42_RS10840	0.48	-0.8
2,318,988	-		RR42_RS10840	0.49	-0.5
2,319,290	+				-0.0
2,319,356	+		RR42_RS10845	0.14	+0.6
2,319,415	+		RR42_RS10845	0.32	-0.0
2,319,415	+		RR42_RS10845	0.32	+0.7
2,319,416	-		RR42_RS10845	0.32	-0.0
2,319,416	-		RR42_RS10845	0.32	-0.7
2,319,821	+				-0.1
2,319,821	+				-0.4
2,319,821	+				+0.4
2,319,822	-				-0.4
2,319,873	+				+0.1
2,319,899	+				-0.0
2,319,901	+				-1.4
2,319,901	+				-1.0
2,319,901	+				-0.4
2,319,901	+				-2.6
2,319,902	-				-1.9
2,319,902	-				+0.7
2,319,902	-				-0.2
2,319,902	-				+1.6
2,320,364	-		RR42_RS10850	0.18	-0.5
2,320,610	+		RR42_RS10850	0.25	-0.6
2,320,610	+		RR42_RS10850	0.25	+0.3
2,320,611	-		RR42_RS10850	0.25	+0.3
2,320,611	-		RR42_RS10850	0.25	-0.1
2,320,611	-		RR42_RS10850	0.25	+0.5