Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10090

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,158,926	+		RR42_RS10085	0.75	+0.2
2,159,078	+		RR42_RS10085	0.80	+0.4
2,159,079	-		RR42_RS10085	0.80	-0.1
2,159,218	+		RR42_RS10085	0.85	-0.7
2,159,222	+		RR42_RS10085	0.85	+0.2
2,159,222	+		RR42_RS10085	0.85	-0.2
2,159,222	+		RR42_RS10085	0.85	-2.8
2,159,222	+		RR42_RS10085	0.85	+0.4
2,159,223	-		RR42_RS10085	0.85	-0.4
2,159,276	+		RR42_RS10085	0.86	+0.2
2,159,315	-		RR42_RS10085	0.88	-0.9
2,159,342	+		RR42_RS10085	0.89	+0.1
2,159,343	-		RR42_RS10085	0.89	-1.4
2,159,343	-		RR42_RS10085	0.89	+0.2
2,159,464	-				-1.4
2,159,464	-				-1.4
2,159,464	-				+0.6
2,159,513	+				-1.2
2,159,623	+				-0.6
2,159,624	-				-0.0
2,159,624	-				-2.0
2,159,894	+		RR42_RS10090	0.20	-0.3
2,159,894	+		RR42_RS10090	0.20	-0.7
2,159,933	+		RR42_RS10090	0.25	-0.0
2,159,957	+		RR42_RS10090	0.28	-0.3
2,159,958	-		RR42_RS10090	0.28	+0.7
2,160,034	+		RR42_RS10090	0.38	+0.9
2,160,040	+		RR42_RS10090	0.39	+0.2
2,160,040	+		RR42_RS10090	0.39	+0.1
2,160,183	+		RR42_RS10090	0.58	+0.9
2,160,210	+		RR42_RS10090	0.61	-0.7
2,160,277	+		RR42_RS10090	0.70	-0.7
2,160,277	+		RR42_RS10090	0.70	+0.7
2,160,277	+		RR42_RS10090	0.70	-2.7
2,160,397	+		RR42_RS10090	0.86	-2.7
2,160,563	+				-0.0
2,160,688	+				-0.2
2,160,688	+				-0.9
2,160,691	-				+0.4
2,160,709	-				-2.2
2,160,734	-				+0.1
2,160,752	-				+0.4
2,161,104	-		RR42_RS10095	0.12	-0.7
2,161,141	+		RR42_RS10095	0.17	-2.1
2,161,141	+		RR42_RS10095	0.17	-0.2
2,161,179	+		RR42_RS10095	0.22	-0.6
2,161,179	+		RR42_RS10095	0.22	+1.2
2,161,180	-		RR42_RS10095	0.22	+1.4
2,161,182	+		RR42_RS10095	0.22	-0.9
2,161,200	-		RR42_RS10095	0.24	+3.1
2,161,217	-		RR42_RS10095	0.27	+0.3
2,161,217	-		RR42_RS10095	0.27	-0.8
2,161,225	+		RR42_RS10095	0.28	+0.2
2,161,225	+		RR42_RS10095	0.28	-0.1
2,161,265	-		RR42_RS10095	0.33	+1.9
2,161,383	+		RR42_RS10095	0.48	-1.0