Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10000

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,136,021	-		RR42_RS09995	0.24	-0.4
2,136,240	+		RR42_RS09995	0.48	+0.2
2,136,243	+		RR42_RS09995	0.48	+0.5
2,136,243	+		RR42_RS09995	0.48	-1.5
2,136,409	+		RR42_RS09995	0.67	-1.8
2,136,409	+		RR42_RS09995	0.67	+0.9
2,136,428	+		RR42_RS09995	0.69	-0.3
2,136,651	+				+0.4
2,136,768	+				+1.8
2,136,808	+				+0.3
2,136,808	+				+0.8
2,136,808	+				-0.5
2,136,809	-				-0.9
2,137,011	-		RR42_RS10000	0.22	+1.4
2,137,134	-		RR42_RS10000	0.36	+0.4
2,137,418	+		RR42_RS10000	0.67	+0.9
2,137,722	-				-0.1
2,138,022	+				-2.7
2,138,022	+				-0.5
2,138,023	-				-0.5
2,138,023	-				-0.6
2,138,023	-				+1.3
2,138,277	+		RR42_RS10005	0.41	+1.4
2,138,367	+		RR42_RS10005	0.55	-1.2
2,138,367	+		RR42_RS10005	0.55	+2.0
2,138,367	+		RR42_RS10005	0.55	-1.4
2,138,367	+		RR42_RS10005	0.55	-0.1
2,138,368	-		RR42_RS10005	0.55	-1.7
2,138,368	-		RR42_RS10005	0.55	-1.1
2,138,437	-		RR42_RS10005	0.66	-0.3
2,138,449	-		RR42_RS10005	0.68	+0.6
2,138,514	+		RR42_RS10005	0.78	-0.6