Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08655

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,812,799	-		RR42_RS08650	0.42	-0.0
1,812,877	-		RR42_RS08650	0.47	+0.9
1,812,877	-		RR42_RS08650	0.47	-1.1
1,812,877	-		RR42_RS08650	0.47	-3.2
1,813,276	-		RR42_RS08650	0.70	-0.8
1,813,313	-		RR42_RS08650	0.72	+0.9
1,813,389	+		RR42_RS08650	0.76	+0.4
1,813,432	-		RR42_RS08650	0.79	-0.6
1,813,461	-		RR42_RS08650	0.80	-0.4
1,813,527	+		RR42_RS08650	0.84	-0.6
1,813,528	-		RR42_RS08650	0.84	-0.2
1,813,678	-				+2.0
1,813,678	-				+0.4
1,813,934	+		RR42_RS08655	0.13	-1.1
1,813,965	-		RR42_RS08655	0.16	-0.3
1,813,975	+		RR42_RS08655	0.17	-0.6
1,814,036	+		RR42_RS08655	0.22	-1.9
1,814,036	+		RR42_RS08655	0.22	-1.1
1,814,037	-		RR42_RS08655	0.23	-2.4
1,814,141	+		RR42_RS08655	0.32	-1.2
1,814,142	-		RR42_RS08655	0.32	+0.6
1,814,204	+		RR42_RS08655	0.38	+1.0
1,814,324	+		RR42_RS08655	0.50	-0.1
1,814,324	+		RR42_RS08655	0.50	+0.4
1,814,324	+		RR42_RS08655	0.50	-0.6
1,814,325	-		RR42_RS08655	0.50	+1.5
1,814,325	-		RR42_RS08655	0.50	+0.4
1,814,325	-		RR42_RS08655	0.50	-0.6
1,814,339	+		RR42_RS08655	0.51	-1.1
1,814,340	-		RR42_RS08655	0.51	-1.3
1,814,340	-		RR42_RS08655	0.51	-0.4
1,814,402	+		RR42_RS08655	0.57	+0.4
1,814,435	+		RR42_RS08655	0.60	-1.4
1,814,436	-		RR42_RS08655	0.60	+0.2
1,814,534	+		RR42_RS08655	0.70	+0.9
1,814,534	+		RR42_RS08655	0.70	-0.7
1,814,535	-		RR42_RS08655	0.70	+0.1
1,814,623	+		RR42_RS08655	0.78	-0.8
1,814,816	+				+0.2
1,814,817	-				-0.9
1,814,916	-				-0.6
1,814,918	-				-1.2
1,814,959	+				-2.1
1,814,959	+				+0.3
1,814,994	-				+0.1
1,815,141	+		RR42_RS08660	0.11	+1.3
1,815,141	+		RR42_RS08660	0.11	-1.1
1,815,142	-		RR42_RS08660	0.11	+1.7
1,815,152	+		RR42_RS08660	0.12	+1.5
1,815,167	+		RR42_RS08660	0.13	+0.8
1,815,168	-		RR42_RS08660	0.13	-0.6
1,815,168	-		RR42_RS08660	0.13	+0.3
1,815,169	+		RR42_RS08660	0.13	-0.4
1,815,169	+		RR42_RS08660	0.13	+0.4
1,815,170	-		RR42_RS08660	0.14	+0.8
1,815,170	-		RR42_RS08660	0.14	+0.9
1,815,242	+		RR42_RS08660	0.21	-0.2
1,815,242	+		RR42_RS08660	0.21	-1.2
1,815,333	+		RR42_RS08660	0.31	+0.6
1,815,333	+		RR42_RS08660	0.31	-0.1
1,815,334	-		RR42_RS08660	0.31	+1.5
1,815,334	-		RR42_RS08660	0.31	+0.9
1,815,334	-		RR42_RS08660	0.31	-0.3
1,815,341	-		RR42_RS08660	0.31	+1.1
1,815,350	-		RR42_RS08660	0.32	-1.6
1,815,367	+		RR42_RS08660	0.34	-1.3
1,815,367	+		RR42_RS08660	0.34	+0.9
1,815,379	-		RR42_RS08660	0.35	-2.2
1,815,469	+		RR42_RS08660	0.45	-0.2
1,815,469	+		RR42_RS08660	0.45	+1.2
1,815,470	-		RR42_RS08660	0.45	-0.6
1,815,543	+		RR42_RS08660	0.52	+0.3
1,815,544	-		RR42_RS08660	0.53	+0.1
1,815,555	-		RR42_RS08660	0.54	-1.6
1,815,653	-		RR42_RS08660	0.64	-0.1
1,815,697	-		RR42_RS08660	0.68	+0.9
1,815,707	+		RR42_RS08660	0.69	+1.1
1,815,726	+		RR42_RS08660	0.71	+0.6
1,815,726	+		RR42_RS08660	0.71	-1.0