Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08485

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,784,698	-		RR42_RS08470	0.62	+0.1
1,784,796	-				+0.7
1,784,833	-		RR42_RS08475	0.18	+0.5
1,785,045	+		RR42_RS08480	0.21	+0.2
1,785,109	-		RR42_RS08480	0.48	+0.0
1,785,191	+		RR42_RS08480	0.81	+1.1
1,785,287	-				-0.6
1,785,374	-				-0.9
1,785,374	-				+0.1
1,785,551	+				-0.4
1,785,569	-				+1.1
1,785,638	+				-1.1
1,785,638	+				+0.1
1,785,652	+				-0.1
1,785,948	+		RR42_RS08485	0.11	-1.1
1,786,164	+		RR42_RS08485	0.19	-1.5
1,786,498	+		RR42_RS08485	0.32	+0.2
1,786,611	+		RR42_RS08485	0.36	+1.0
1,786,791	-		RR42_RS08485	0.42	-0.2
1,786,912	+		RR42_RS08485	0.47	-0.0
1,786,912	+		RR42_RS08485	0.47	+0.5
1,786,913	-		RR42_RS08485	0.47	+1.6
1,786,953	+		RR42_RS08485	0.48	+0.1
1,786,954	-		RR42_RS08485	0.49	+0.6
1,786,954	-		RR42_RS08485	0.49	+2.6
1,786,954	-		RR42_RS08485	0.49	+2.0
1,786,954	-		RR42_RS08485	0.49	+1.4
1,786,983	+		RR42_RS08485	0.50	-1.1
1,786,983	+		RR42_RS08485	0.50	-0.0
1,786,984	-		RR42_RS08485	0.50	+0.2
1,786,984	-		RR42_RS08485	0.50	+1.8
1,787,061	+		RR42_RS08485	0.52	-0.9
1,787,062	-		RR42_RS08485	0.53	+1.2
1,787,181	+		RR42_RS08485	0.57	-0.6
1,787,184	+		RR42_RS08485	0.57	+0.8
1,787,217	+		RR42_RS08485	0.58	-1.4
1,787,218	-		RR42_RS08485	0.58	-0.0
1,787,220	+		RR42_RS08485	0.58	-2.0
1,787,220	+		RR42_RS08485	0.58	-1.2
1,787,220	+		RR42_RS08485	0.58	+1.2
1,787,221	-		RR42_RS08485	0.58	+1.4
1,787,221	-		RR42_RS08485	0.58	-1.2
1,787,373	+		RR42_RS08485	0.64	-2.2
1,787,424	+		RR42_RS08485	0.66	-1.1
1,787,478	+		RR42_RS08485	0.68	-0.3
1,787,647	+		RR42_RS08485	0.74	-1.1
1,787,647	+		RR42_RS08485	0.74	+1.3
1,787,764	+		RR42_RS08485	0.78	+0.6
1,787,764	+		RR42_RS08485	0.78	+1.7
1,787,765	-		RR42_RS08485	0.78	-1.5
1,787,843	-		RR42_RS08485	0.81	+0.4
1,787,935	-		RR42_RS08485	0.85	+1.2
1,787,997	+		RR42_RS08485	0.87	+0.4
1,788,012	+		RR42_RS08485	0.88	-0.2
1,788,060	+		RR42_RS08485	0.89	+1.9
1,788,464	+		RR42_RS08490	0.18	-1.9
1,788,465	-		RR42_RS08490	0.18	+1.6
1,788,656	-		RR42_RS08490	0.53	+2.1
1,788,662	+		RR42_RS08490	0.54	+0.7
1,788,662	+		RR42_RS08490	0.54	-0.5
1,788,662	+		RR42_RS08490	0.54	-0.0
1,788,882	-				+0.7
1,789,092	+		RR42_RS08495	0.27	+1.8
1,789,093	-		RR42_RS08495	0.27	+2.2
1,789,162	-		RR42_RS08495	0.55	-0.8
1,789,162	-		RR42_RS08495	0.55	+1.0
1,789,191	+		RR42_RS08495	0.67	-0.6
1,789,192	-		RR42_RS08495	0.67	+0.9
1,789,194	-		RR42_RS08495	0.68	+0.7
1,789,214	+		RR42_RS08495	0.76	+2.6
1,789,215	-		RR42_RS08495	0.76	+1.9
1,789,215	-		RR42_RS08495	0.76	-1.0
1,789,235	-		RR42_RS08495	0.84	+1.5
1,789,332	+				-0.2
1,789,333	-				-0.0